Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0203g00070.t01
CDS Infomation

cds chromosome:12X:Un:11882228:11883522:1 gene:VIT_00s0203g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGATCACCTTGCTGCGATAAGAATGGTCTCAAAAAGGGACCCTGGACTCCTGAA
GAGGATCAGAAACTCATTGATTATATCCAGAAAAATGGCTATGGAAACTGGAGGACACTT
CCTAAAAATGCCGGGCTGCAAAGGTGCGGTAAAAGCTGCCGTCTCCGGTGGACTAACTAC
CTGAGGCCAGATATCAAGAGGGGTCGTTTCTCTTTCGAAGAGGAGGAGACAATAATTCAG
CTCCACAGCATCTTGGGTAACAAGTGGTCTGCCATTGCTGCTCGCCTGCCTGGAAGGACT
GATAATGAAATCAAGAACTACTGGAACACCCACATTAGAAAAAGGCTACTGAGAATGGGA
ATTGATCCAGTGACTCACAGTCCTCGCCTCGATCTTCTTGACCTGTCATCAATTTTAAGC
ACTTCTCTCTACAATTCCTCACACATGAACGTTTCGAGGTTTCTCGGGATGCAACCACTC
GTCAATCCGGAGCTTCTAAGGCTAGCCACATCCCTCATGTCCTCTCAGCGAGAAAATCCA
AACTTTCTCCTTCAGAATGTCCAAGAAAACCAGCTGTGCAATGCCCAAGTTCAAAACTCA
TTCACACACTTGGTCCAACCTAACCAAATTCAAACCCCAATTCAAGAAATTCCAGCTTGC
AACCCATTAAGTAGTTCGTTTTCTAATGAATCGCAAGTCATGGAGCCAAATGCAGAACAA
TTCCCATCAAATATCACAGATTTTAGCTCCCAAAATTCTCAACTGATCAGCGATTGGCAA
AGCAACGGATTGCCTAGTGATCTAAGTGAAGAGTACTACGTCCCTCACCCGAGTTCTGTA
GGCTATTACGGGTCCGAACAAACCATCATGGATCCCTCCTCTGACAACTCTGTTTTTCAG
TCCAACAACAACTTCAGCTTCGCCTCCGTTCTATCGACGCCTTCCTCAAGCCCAACGCCT
TTGAATTCAAATTCAACCTACATAAACAGCAGCACAGAGGATGAAAGGGAGATCAGCTAC
GGAAGCAACATGTACTTGAAGTTCGAAACTCCTGATCATCTCTTGGATGTTAACTACGAA
ATGATGTAA

Peptide Sequence

PEP ID

VIT_00s0203g00070.t01
PEP Infomation

pep chromosome:12X:Un:11882228:11883522:1 gene:VIT_00s0203g00070 transcript:VIT_00s0203g00070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGRSPCCDKNGLKKGPWTPEEDQKLIDYIQKNGYGNWRTLPKNAGLQRCGKSCRLRWTNY
LRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG
IDPVTHSPRLDLLDLSSILSTSLYNSSHMNVSRFLGMQPLVNPELLRLATSLMSSQRENP
NFLLQNVQENQLCNAQVQNSFTHLVQPNQIQTPIQEIPACNPLSSSFSNESQVMEPNAEQ
FPSNITDFSSQNSQLISDWQSNGLPSDLSEEYYVPHPSSVGYYGSEQTIMDPSSDNSVFQ
SNNNFSFASVLSTPSSSPTPLNSNSTYINSSTEDEREISYGSNMYLKFETPDHLLDVNYE
MM

Transcript Sequence

Transcript ID

VIT_00s0203g00070.t01
Transcript Infomation

cdna chromosome:12X:Un:11882228:11883522:1 gene:VIT_00s0203g00070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGCATGGGAAGATCACCTTGCTGCGATAAGAATGGTCTCAAAAAGGGACCCTGGACTCC
TGAAGAGGATCAGAAACTCATTGATTATATCCAGAAAAATGGCTATGGAAACTGGAGGAC
ACTTCCTAAAAATGCCGGGCTGCAAAGGTGCGGTAAAAGCTGCCGTCTCCGGTGGACTAA
CTACCTGAGGCCAGATATCAAGAGGGGTCGTTTCTCTTTCGAAGAGGAGGAGACAATAAT
TCAGCTCCACAGCATCTTGGGTAACAAGTGGTCTGCCATTGCTGCTCGCCTGCCTGGAAG
GACTGATAATGAAATCAAGAACTACTGGAACACCCACATTAGAAAAAGGCTACTGAGAAT
GGGAATTGATCCAGTGACTCACAGTCCTCGCCTCGATCTTCTTGACCTGTCATCAATTTT
AAGCACTTCTCTCTACAATTCCTCACACATGAACGTTTCGAGGTTTCTCGGGATGCAACC
ACTCGTCAATCCGGAGCTTCTAAGGCTAGCCACATCCCTCATGTCCTCTCAGCGAGAAAA
TCCAAACTTTCTCCTTCAGAATGTCCAAGAAAACCAGCTGTGCAATGCCCAAGTTCAAAA
CTCATTCACACACTTGGTCCAACCTAACCAAATTCAAACCCCAATTCAAGAAATTCCAGC
TTGCAACCCATTAAGTAGTTCGTTTTCTAATGAATCGCAAGTCATGGAGCCAAATGCAGA
ACAATTCCCATCAAATATCACAGATTTTAGCTCCCAAAATTCTCAACTGATCAGCGATTG
GCAAAGCAACGGATTGCCTAGTGATCTAAGTGAAGAGTACTACGTCCCTCACCCGAGTTC
TGTAGGCTATTACGGGTCCGAACAAACCATCATGGATCCCTCCTCTGACAACTCTGTTTT
TCAGTCCAACAACAACTTCAGCTTCGCCTCCGTTCTATCGACGCCTTCCTCAAGCCCAAC
GCCTTTGAATTCAAATTCAACCTACATAAACAGCAGCACAGAGGATGAAAGGGAGATCAG
CTACGGAAGCAACATGTACTTGAAGTTCGAAACTCCTGATCATCTCTTGGATGTTAACTA
CGAAATGATGTAA