Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0201g00060.t01
CDS Infomation

cds chromosome:12X:Un:11423078:11431723:1 gene:VIT_00s0201g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGACGTCAGCGTTCAAATCGACAACTAAGAGGTCGTCGATCGGGACGCCGTCAAGA
GCCGGGACTTCCAGCTCATCAGCTCATCGCCGGTCGAGGAGTCTCAGCCGGTTCTCTCGG
AAGGTTCCGGCGGCGGAGGAGGAGGATTTCGAGGAGGTTCCGGTGCCCAAGGGGAGATTT
GTTAATACTGTGAGAGGATCGGGGTTCCCGGAGATCAGCCTAGATGATCTGGCGGTGGAT
TTCTTCGGGTCTGCCGAGAGAGGTCGGAGTTCTGAATCTTCTGTTGTTGGCCATTCCGTG
ACGGCAGGGTCGTCTCAGAGGCGGGGGAGGTCGGTGTCGAGGAGAGGCGCTGATGGAAAT
GGATGTACTTCTGAGAATTTTGGTGTTGGAAGGGCTGTTTCTGACAACAATTCGAGGAGG
AGAAGGTCGGTTTCGGTGGTGCGGCAGCAGATTAGCGATTATGAGAGCGATGTAGATCTT
TCTCAAAATTATAGGAATCGTGCTAATCTGAAGAGTTTCAGTGATGGAAATGGACAAATG
CCTTCATCACAGAAGCCTACAATTTCAAATCATCGTAGATTTCTGGGAAGGTCTTTGAGC
CAGAAGGATCTATTAAAGTCAAATGATGGTTACTCTAGCCAGTCTTCTGCTGTAACCGAT
GATGAAGCAAGGGATGGTTGTTCCAGTAAAAATGGGATTGTGAAGACAATACGAGCTGTT
TATGCACAGAAGAAGGCCGAGCACCCAACCGGGGATGATGTGAATGGTGGGCTGTATGAG
GCAATGCGTAAAGAGCTTAGACATGCTGTGGAAGAGATCAAAATGGAACTCGAACAGGCC
ATGGCAAACACAAACACAAGTGGTGATCATCTGCAATCCAATAATTCCGACGTTCTTGAT
GTTTCCACTGTCAGAAGAAATTATGCTACGAAATTGGAACAGTCAGAGAAGCGTAAACAA
GATCTATTAGCTGAAATTCTATTGGAGGAGCAACGTGGGAGAGAGCTCTCTAAGATTGTA
AAAGAATTGCTTCCTGATTCTAAGGACACAGCTTCTGTAGAAAAACCATCACGAGCCAGA
AAGAGAAGTAATGACAGAAATAGGATGTCTAAGCGACTGACTGAGGAGGCAGAGAAATAT
TTTGAGGACTTCATATCAAATGTTGAAGATACAGATATTTCGTCATTTGATGGTGAAAGG
AGTGATGGAAGTTCAACTTTAAGTGGAATAACAAAACCAAGGGAACCTGAGAAGCATAGC
AGGGAACCAGAAATTTTTCGAAGCCCAGCACCATCTTATTCTCTTCCTTCTGAAATGGAT
GGGTTGGTTCTCCCTTGGTTGCAATGGGAGACTCATAATGATAGTTCTCCCCTATCATGC
AACAAGAAGACAAAGCAGCCAGTGACTCCAAAAACTCTTGTGTGGGATTCAGCTCAGGAG
GGCATGAATGCACAAGATCAAATTAACCGTTCCATCAGTAGCCATGGTAGTTGGAGCCCT
GGAATTGTGGACAGCCCTTCCATTAACACAGGACACGATCTGGGGAGCAAATTTGGAGGA
CCTGGAAGTTCACAGGGCCAATCCTTTAGGAGATCAGGATTTGACATGGATGAGTATGAG
AGTCTTAAATGCAACGAAGATCTTCTATTTGAAAGATGGAGACAACGGCAGAGAATAAAT
TCAGGTGGTCTCCTGCTTTGTGGCAACATTCTTCTTTAG

Peptide Sequence

PEP ID

VIT_00s0201g00060.t01
PEP Infomation

pep chromosome:12X:Un:11423078:11431723:1 gene:VIT_00s0201g00060 transcript:VIT_00s0201g00060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATSAFKSTTKRSSIGTPSRAGTSSSSAHRRSRSLSRFSRKVPAAEEEDFEEVPVPKGRF
VNTVRGSGFPEISLDDLAVDFFGSAERGRSSESSVVGHSVTAGSSQRRGRSVSRRGADGN
GCTSENFGVGRAVSDNNSRRRRSVSVVRQQISDYESDVDLSQNYRNRANLKSFSDGNGQM
PSSQKPTISNHRRFLGRSLSQKDLLKSNDGYSSQSSAVTDDEARDGCSSKNGIVKTIRAV
YAQKKAEHPTGDDVNGGLYEAMRKELRHAVEEIKMELEQAMANTNTSGDHLQSNNSDVLD
VSTVRRNYATKLEQSEKRKQDLLAEILLEEQRGRELSKIVKELLPDSKDTASVEKPSRAR
KRSNDRNRMSKRLTEEAEKYFEDFISNVEDTDISSFDGERSDGSSTLSGITKPREPEKHS
REPEIFRSPAPSYSLPSEMDGLVLPWLQWETHNDSSPLSCNKKTKQPVTPKTLVWDSAQE
GMNAQDQINRSISSHGSWSPGIVDSPSINTGHDLGSKFGGPGSSQGQSFRRSGFDMDEYE
SLKCNEDLLFERWRQRQRINSGGLLLCGNILL

Transcript Sequence

Transcript ID

VIT_00s0201g00060.t01
Transcript Infomation

cdna chromosome:12X:Un:11423078:11431723:1 gene:VIT_00s0201g00060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTTCGTGGCTTCTCCGTCAGCTCAGTCTCATTCTCTCTCTTTCTTTCTAGAAATTACT
CTCCCTTGAATGGAGAATTAGAGTGTGGAAACCCTCTTTTCTGGATTCATTTCTCAGTGA
ATATGGCGACGTCAGCGTTCAAATCGACAACTAAGAGGTCGTCGATCGGGACGCCGTCAA
GAGCCGGGACTTCCAGCTCATCAGCTCATCGCCGGTCGAGGAGTCTCAGCCGGTTCTCTC
GGAAGGTTCCGGCGGCGGAGGAGGAGGATTTCGAGGAGGTTCCGGTGCCCAAGGGGAGAT
TTGTTAATACTGTGAGAGGATCGGGGTTCCCGGAGATCAGCCTAGATGATCTGGCGGTGG
ATTTCTTCGGGTCTGCCGAGAGAGGTCGGAGTTCTGAATCTTCTGTTGTTGGCCATTCCG
TGACGGCAGGGTCGTCTCAGAGGCGGGGGAGGTCGGTGTCGAGGAGAGGCGCTGATGGAA
ATGGATGTACTTCTGAGAATTTTGGTGTTGGAAGGGCTGTTTCTGACAACAATTCGAGGA
GGAGAAGGTCGGTTTCGGTGGTGCGGCAGCAGATTAGCGATTATGAGAGCGATGTAGATC
TTTCTCAAAATTATAGGAATCGTGCTAATCTGAAGAGTTTCAGTGATGGAAATGGACAAA
TGCCTTCATCACAGAAGCCTACAATTTCAAATCATCGTAGATTTCTGGGAAGGTCTTTGA
GCCAGAAGGATCTATTAAAGTCAAATGATGGTTACTCTAGCCAGTCTTCTGCTGTAACCG
ATGATGAAGCAAGGGATGGTTGTTCCAGTAAAAATGGGATTGTGAAGACAATACGAGCTG
TTTATGCACAGAAGAAGGCCGAGCACCCAACCGGGGATGATGTGAATGGTGGGCTGTATG
AGGCAATGCGTAAAGAGCTTAGACATGCTGTGGAAGAGATCAAAATGGAACTCGAACAGG
CCATGGCAAACACAAACACAAGTGGTGATCATCTGCAATCCAATAATTCCGACGTTCTTG
ATGTTTCCACTGTCAGAAGAAATTATGCTACGAAATTGGAACAGTCAGAGAAGCGTAAAC
AAGATCTATTAGCTGAAATTCTATTGGAGGAGCAACGTGGGAGAGAGCTCTCTAAGATTG
TAAAAGAATTGCTTCCTGATTCTAAGGACACAGCTTCTGTAGAAAAACCATCACGAGCCA
GAAAGAGAAGTAATGACAGAAATAGGATGTCTAAGCGACTGACTGAGGAGGCAGAGAAAT
ATTTTGAGGACTTCATATCAAATGTTGAAGATACAGATATTTCGTCATTTGATGGTGAAA
GGAGTGATGGAAGTTCAACTTTAAGTGGAATAACAAAACCAAGGGAACCTGAGAAGCATA
GCAGGGAACCAGAAATTTTTCGAAGCCCAGCACCATCTTATTCTCTTCCTTCTGAAATGG
ATGGGTTGGTTCTCCCTTGGTTGCAATGGGAGACTCATAATGATAGTTCTCCCCTATCAT
GCAACAAGAAGACAAAGCAGCCAGTGACTCCAAAAACTCTTGTGTGGGATTCAGCTCAGG
AGGGCATGAATGCACAAGATCAAATTAACCGTTCCATCAGTAGCCATGGTAGTTGGAGCC
CTGGAATTGTGGACAGCCCTTCCATTAACACAGGACACGATCTGGGGAGCAAATTTGGAG
GACCTGGAAGTTCACAGGGCCAATCCTTTAGGAGATCAGGATTTGACATGGATGAGTATG
AGAGTCTTAAATGCAACGAAGATCTTCTATTTGAAAGATGGAGACAACGGCAGAGAATAA
ATTCAGGTGGTCTCCTGCTTTGTGGCAACATTCTTCTTTAGCATTCCCTTGAGTTTACAT
ACTCTGCGGCCTTAATTTCATCCATCTCCCGCATTTTTCTTAATCGTCCTTAGCTAAGAT
AGCATGCATTCTTG