Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0199g00210.t01
CDS Infomation

cds chromosome:12X:Un:11226339:11228800:1 gene:VIT_00s0199g00210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAGTGGTTTTGACTACTCAGTCTCAAGCCTTCTTTGCTCAGAAACCCATACTGTG
TGCTTTGATGATCTTGATTGTAACGCCATTGATGAGTTTTTTCCTTGGAATTTTCAAAAC
CATTATCAAAACCCGATTTTTAGAAACAGTAGATCGGAGTCCTGGATTGAGTGCCCAATG
CTTAGCGAAGAGCGTCTCAGAGAAATGGTTGAGAGAGAGGGGGAGTATATGCCTAGAGAT
GACTATCTGGGGAGGTTGAGAAGTGGGGACTTGGACCTGGGTGTGAGGAGAGAGGCTGTC
GATTGGATTTTGAAGGCTCATGCTTGTCATGGCTTCGGACCACTGAGTCTTTATTTATCT
ATAAACTTCCTGGATCGAGTCCTATCGGTCTACCAACTTCCTACTAGAAGGCCTTGGATC
GTGAGATTGTTATCTGTAGCCTGTTTATCAGTAGCAGCCAAGGTGGAGGAGACTAACGTG
CCTCTTTCTATAGAGTTACAGGAGGTGGGAGACCCCAGGCTTATGTTTGAAGCTAAAACC
ATTAGGAGAATGGAGCTTCTGGTGTTGACCCACTTGAAGTGGAAAATGCAAGCTTTTACT
CCTTGCTCCTTCATAGACTACTTTCTCAGTAAGGTTAATGACCATAAATATCCATCAGGC
TCCTTAATCTCTAGATCAATACAACTCATCTTAAGCACAATTAAAGGTATTGACTTCTTG
GAATTTAAGGCTTCTGAAATTGCTGCAGCAGTGGCTATATGCGTTTCCGAAGAAATACAA
GACATTGATAAGGCTATGTCATGTTTGATACATGTAGATGAGGGAAGAGTGTTGAAGTGT
GTTCAACTGATCCAGAATGCGGCATTGCTGGGTGCTTCCACTGAAGTAGCAGGTGCCTCG
GCAGCATCTGTGCCCCTGAGCCCAGTTGGGGTGTTGGATGCGGCATGCTGGAGCTATAAA
AGTGATGATCTAACCGTTGGGTCATGTGCAAATTCTTCACATAATACCCCAGACGGCAAG
AGGAGGAAACTAGAGAGACCATCTGGAGGGGGAGATTTCTGA

Peptide Sequence

PEP ID

VIT_00s0199g00210.t01
PEP Infomation

pep chromosome:12X:Un:11226339:11228800:1 gene:VIT_00s0199g00210 transcript:VIT_00s0199g00210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGSGFDYSVSSLLCSETHTVCFDDLDCNAIDEFFPWNFQNHYQNPIFRNSRSESWIECPM
LSEERLREMVEREGEYMPRDDYLGRLRSGDLDLGVRREAVDWILKAHACHGFGPLSLYLS
INFLDRVLSVYQLPTRRPWIVRLLSVACLSVAAKVEETNVPLSIELQEVGDPRLMFEAKT
IRRMELLVLTHLKWKMQAFTPCSFIDYFLSKVNDHKYPSGSLISRSIQLILSTIKGIDFL
EFKASEIAAAVAICVSEEIQDIDKAMSCLIHVDEGRVLKCVQLIQNAALLGASTEVAGAS
AASVPLSPVGVLDAACWSYKSDDLTVGSCANSSHNTPDGKRRKLERPSGGGDF

Transcript Sequence

Transcript ID

VIT_00s0199g00210.t01
Transcript Infomation

cdna chromosome:12X:Un:11226339:11228800:1 gene:VIT_00s0199g00210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTAGACTCTCCCTCTCTCTGTCTCTCTCCAAATCTCCATTTCTGGCACGGTAGAACCCAG
GAAAATCCTTGTCTACTATTCTCATTTGATGAGATATTGCTGGTTCTGAAGCCACATTGA
GGTTTCTGCAATGGGAAGTGGTTTTGACTACTCAGTCTCAAGCCTTCTTTGCTCAGAAAC
CCATACTGTGTGCTTTGATGATCTTGATTGTAACGCCATTGATGAGTTTTTTCCTTGGAA
TTTTCAAAACCATTATCAAAACCCGATTTTTAGAAACAGTAGATCGGAGTCCTGGATTGA
GTGCCCAATGCTTAGCGAAGAGCGTCTCAGAGAAATGGTTGAGAGAGAGGGGGAGTATAT
GCCTAGAGATGACTATCTGGGGAGGTTGAGAAGTGGGGACTTGGACCTGGGTGTGAGGAG
AGAGGCTGTCGATTGGATTTTGAAGGCTCATGCTTGTCATGGCTTCGGACCACTGAGTCT
TTATTTATCTATAAACTTCCTGGATCGAGTCCTATCGGTCTACCAACTTCCTACTAGAAG
GCCTTGGATCGTGAGATTGTTATCTGTAGCCTGTTTATCAGTAGCAGCCAAGGTGGAGGA
GACTAACGTGCCTCTTTCTATAGAGTTACAGGAGGTGGGAGACCCCAGGCTTATGTTTGA
AGCTAAAACCATTAGGAGAATGGAGCTTCTGGTGTTGACCCACTTGAAGTGGAAAATGCA
AGCTTTTACTCCTTGCTCCTTCATAGACTACTTTCTCAGTAAGGTTAATGACCATAAATA
TCCATCAGGCTCCTTAATCTCTAGATCAATACAACTCATCTTAAGCACAATTAAAGGTAT
TGACTTCTTGGAATTTAAGGCTTCTGAAATTGCTGCAGCAGTGGCTATATGCGTTTCCGA
AGAAATACAAGACATTGATAAGGCTATGTCATGTTTGATACATGTAGATGAGGGAAGAGT
GTTGAAGTGTGTTCAACTGATCCAGAATGCGGCATTGCTGGGTGCTTCCACTGAAGTAGC
AGGTGCCTCGGCAGCATCTGTGCCCCTGAGCCCAGTTGGGGTGTTGGATGCGGCATGCTG
GAGCTATAAAAGTGATGATCTAACCGTTGGGTCATGTGCAAATTCTTCACATAATACCCC
AGACGGCAAGAGGAGGAAACTAGAGAGACCATCTGGAGGGGGAGATTTCTGAGTCATGAA
ACGTGGATTTTGCCCCTTCACATCACACCCCCCTCTTCCCCCCAAGTCCCCAATCTGTTT
GGTTGAATGGGAGTTTTGGTGTGGCTTGGACACATAGGAGCGAGGGAGAGAGGGAGAAGT
TTTTGAATGAGGTGGTGGAGGGGGAATCAACAAGTTTCATGCTTTTTAGCCTGAAAAGGA
TAACTCCCCAGCTGTTAATTATCAGATTTCTTTCTTAACAGCTATAGCTATACAAGTAGG
TGGAGGTTGAGGACCAAAATTTGAAGTTTTCATTTCTTTTGTTCAGAGGGGATACAGCTT
TCTTGTTGCTGCTATTTCATATTTAGGAAAAAAAATCAAAAAA