Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0198g00170.t01
CDS Infomation

cds chromosome:12X:Un:11018776:11053143:1 gene:VIT_00s0198g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTACATCACCCTTGGAAGAGGTTAATTCTGAATTGCAGAATGATGCAATCCTCCCT
GAAACACAAGTGGTCAATGAACAGCTTTGGGTGGATAAATATTCTCCAAGTTCATTTACA
GAGCTTCTCAGTGATGAACAGACAAATCGTGAGGTCCTCTTGTGGTTGAAACAGTGGGAT
TCCTGTGTTTTTGGATCTGAAATTAGGAGCACGACGGAGGAGGTCTTGTCTGCTTTGAGA
CGACATTCTTCCATTGCTCAACATCAAAGGCCCTCTGGTATGAGCCTTCATAGGAAGAAT
AAAGGACAGCGATTGAGTGATGGAAACTCCAGATACTCTAATAATTTGGATCAAGAAAAT
GGGAATTTGAAAGGCCTTCAGGAGTTGTGGAATAAAAAGTCAAGGGGTACTGGTCCTCCA
GAACAAAAGATCCTCTTGCTTTGTGGTCCCCCAGGACTTGGGAAGACAACACTTGCACAT
GTCGCTGCTAAGCATTGTGGATACCGTGTGGTGGAGATAAATGCTAGTGATGATCGGTCA
TCTTCAACAATTGAAGCTAAAATCCTTGATGTGGTCCAGATGAACTCTGTCATGGCAGAT
TCGAAGCCCAATTGTTTGGTGATTGATGAAATAGATGGAGCTCTTAGTGATGGCAAGGGT
GCTGTGGAGGTTATTCTAAAAATGGTTTCTACTGAAAGGAAAGCTGATAATAGGAAGGGA
AATGTTGCTAAAGTAGATGAGTCAGGACAGATATCCTCAAAAAAGGGGCATAAAACTGCA
TCATTGTCAAGACCTGTGATTTGCATATGTAATGATCTATATGCACCTGCCCTGAGGCCT
TTGCGTCAGGTAGCAAAGGTTCACATTTTTGTTCAACCGACAGTGAGTCGTGTGGTAAGC
AGACTCAAATATATATGTAATATGGAAGGCCTAAAGACAAATTCCACGGCACTTGCTGCA
CTTGCAGAGTATACTGAATGTGACATCCGTTCGTGCTTGAACACACTACAGTTTCTCAAC
AAGAAGAATCAAACCCTCAATGTGTTTGAGATCAGTTCCCAAGTGGTAGGTCAAAAGGAC
ATGTCTAGAAGCATCTTTGATATCTGGAAAGAGATTTTTCAGGACAGAAAAATGAAGCGA
GCAAAAAGATCTGATAATTGCTGCAGTGGTATGTCCAATGGATTTGACTTTCTGTACCCT
CTCATATCTAATCGTGGTGACTATGATTTAATTTTGGATGGCATCCATGAAAATATTTTC
CAGCTTCATTATCATGACCCAATAATGCAGAAGACAGTCAAGTGCTTAAACACTCTTGGC
ATTTCTGATCTAGTGCACCAATATGTTATGCGTACACAGCAGATGTCCCTTAATGTTTAT
CAGCCTCTTACTGCAATTAGTTTACATCGTTTAATAGCCCAAGTTCAAAAACCAATTATT
GAATGGCCGAAGTCTTTTATGAGATACCGAACGACATTCATGGAAAAGAGGGATATTTTG
AGGTCTTGGCACAACAAAATTGCACCATATATTTCAAGGCATTTGTCTATTAAATCTTTT
GTAGAAGATTCGGTTTCTCCATTATTGCATATTCTATCACCACCAACTCTAAGACCGGTG
GCATTGCACTTACTATCAGAAAGAGAAAGGAATGACCTAGCTCAGTTAATTAATGCTATG
GTGTCCTTTTCAATAACATACAAGAACATGAAATCTGATCCTCTACCTGGTACCCAGCTA
CATGAAGCAGCTTCAGATGGCTTGTCACTTTCCTTTGATCCCCCAATTGCTGACTTCGTC
ACCTTCAAGGTTTGA

Peptide Sequence

PEP ID

VIT_00s0198g00170.t01
PEP Infomation

pep chromosome:12X:Un:11018776:11053143:1 gene:VIT_00s0198g00170 transcript:VIT_00s0198g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSTSPLEEVNSELQNDAILPETQVVNEQLWVDKYSPSSFTELLSDEQTNREVLLWLKQWD
SCVFGSEIRSTTEEVLSALRRHSSIAQHQRPSGMSLHRKNKGQRLSDGNSRYSNNLDQEN
GNLKGLQELWNKKSRGTGPPEQKILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRS
SSTIEAKILDVVQMNSVMADSKPNCLVIDEIDGALSDGKGAVEVILKMVSTERKADNRKG
NVAKVDESGQISSKKGHKTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVS
RLKYICNMEGLKTNSTALAALAEYTECDIRSCLNTLQFLNKKNQTLNVFEISSQVVGQKD
MSRSIFDIWKEIFQDRKMKRAKRSDNCCSGMSNGFDFLYPLISNRGDYDLILDGIHENIF
QLHYHDPIMQKTVKCLNTLGISDLVHQYVMRTQQMSLNVYQPLTAISLHRLIAQVQKPII
EWPKSFMRYRTTFMEKRDILRSWHNKIAPYISRHLSIKSFVEDSVSPLLHILSPPTLRPV
ALHLLSERERNDLAQLINAMVSFSITYKNMKSDPLPGTQLHEAASDGLSLSFDPPIADFV
TFKV

Transcript Sequence

Transcript ID

VIT_00s0198g00170.t01
Transcript Infomation

cdna chromosome:12X:Un:11018776:11053143:1 gene:VIT_00s0198g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGTACATCACCCTTGGAAGAGGTTAATTCTGAATTGCAGAATGATGCAATCCTCCCT
GAAACACAAGTGGTCAATGAACAGCTTTGGGTGGATAAATATTCTCCAAGTTCATTTACA
GAGCTTCTCAGTGATGAACAGACAAATCGTGAGGTCCTCTTGTGGTTGAAACAGTGGGAT
TCCTGTGTTTTTGGATCTGAAATTAGGAGCACGACGGAGGAGGTCTTGTCTGCTTTGAGA
CGACATTCTTCCATTGCTCAACATCAAAGGCCCTCTGGTATGAGCCTTCATAGGAAGAAT
AAAGGACAGCGATTGAGTGATGGAAACTCCAGATACTCTAATAATTTGGATCAAGAAAAT
GGGAATTTGAAAGGCCTTCAGGAGTTGTGGAATAAAAAGTCAAGGGGTACTGGTCCTCCA
GAACAAAAGATCCTCTTGCTTTGTGGTCCCCCAGGACTTGGGAAGACAACACTTGCACAT
GTCGCTGCTAAGCATTGTGGATACCGTGTGGTGGAGATAAATGCTAGTGATGATCGGTCA
TCTTCAACAATTGAAGCTAAAATCCTTGATGTGGTCCAGATGAACTCTGTCATGGCAGAT
TCGAAGCCCAATTGTTTGGTGATTGATGAAATAGATGGAGCTCTTAGTGATGGCAAGGGT
GCTGTGGAGGTTATTCTAAAAATGGTTTCTACTGAAAGGAAAGCTGATAATAGGAAGGGA
AATGTTGCTAAAGTAGATGAGTCAGGACAGATATCCTCAAAAAAGGGGCATAAAACTGCA
TCATTGTCAAGACCTGTGATTTGCATATGTAATGATCTATATGCACCTGCCCTGAGGCCT
TTGCGTCAGGTAGCAAAGGTTCACATTTTTGTTCAACCGACAGTGAGTCGTGTGGTAAGC
AGACTCAAATATATATGTAATATGGAAGGCCTAAAGACAAATTCCACGGCACTTGCTGCA
CTTGCAGAGTATACTGAATGTGACATCCGTTCGTGCTTGAACACACTACAGTTTCTCAAC
AAGAAGAATCAAACCCTCAATGTGTTTGAGATCAGTTCCCAAGTGGTAGGTCAAAAGGAC
ATGTCTAGAAGCATCTTTGATATCTGGAAAGAGATTTTTCAGGACAGAAAAATGAAGCGA
GCAAAAAGATCTGATAATTGCTGCAGTGGTATGTCCAATGGATTTGACTTTCTGTACCCT
CTCATATCTAATCGTGGTGACTATGATTTAATTTTGGATGGCATCCATGAAAATATTTTC
CAGCTTCATTATCATGACCCAATAATGCAGAAGACAGTCAAGTGCTTAAACACTCTTGGC
ATTTCTGATCTAGTGCACCAATATGTTATGCGTACACAGCAGATGTCCCTTAATGTTTAT
CAGCCTCTTACTGCAATTAGTTTACATCGTTTAATAGCCCAAGTTCAAAAACCAATTATT
GAATGGCCGAAGTCTTTTATGAGATACCGAACGACATTCATGGAAAAGAGGGATATTTTG
AGGTCTTGGCACAACAAAATTGCACCATATATTTCAAGGCATTTGTCTATTAAATCTTTT
GTAGAAGATTCGGTTTCTCCATTATTGCATATTCTATCACCACCAACTCTAAGACCGGTG
GCATTGCACTTACTATCAGAAAGAGAAAGGAATGACCTAGCTCAGTTAATTAATGCTATG
GTGTCCTTTTCAATAACATACAAGAACATGAAATCTGATCCTCTACCTGGTACCCAGCTA
CATGAAGCAGCTTCAGATGGCTTGTCACTTTCCTTTGATCCCCCAATTGCTGACTTCGTC
ACCTTCAAGGTTTGAGGATTTAGTTTGGGTCATTATGCTCTTGGTGTAGCTGTCAAACAG
CTTTTGATGCATGAGGTGAAAAAGAAAAAAATTTTGCAAGGAAGCATGAGCAAAACT