Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0194g00270.t01
CDS Infomation

cds chromosome:12X:Un:10731146:10733471:-1 gene:VIT_00s0194g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTACCATCTCTGCTCTTCGCCCTCCTCTCTCTGCCATGACCACCATTATCTCCAC
AACTCTCTTTCTTTCTCACGGAAATCAAGGCTGAGAAGCTTCAATAGCTTCTCTTTCAAA
CCCAATTCTCTCTCACTTCACTCAAGAACCTTTCTCCAAATCACCCATGTCTCTTTAGAG
GACCCAATTCCACAAGAAACCCAGAAGGCAGATGCCTCAAATCCACCAAATTCTCAAGAC
CCAGATAGGAAAACCAAAAGTTACATCTGGGTCAACCCCAGAAGCCCCAGAGCTTCGAAG
CTTCGTCAGCACTCGTATGATGCCAGGTATGCTTCTCTAGTGAAAATAGCCGAGTCTTTG
GACTCGTGTGAGGCCACTGAGGAAGATGTTTCTCAGGTTTTGAGGTGTTTAGGTGATAAG
ATATTAGAGCAGGACGCTGTGATTGTCCTCAACAACATGACGAACCCGGAAACGGCACTT
CTTGCTTTTGGTTTCTTTCGGAAGAGATTGAAACCGAGCAGAGAGGTGATTCTGTATAAT
GTGACCTTGAAGGTTTTTAGGAAGTGTAGGAACTTGGATAGAGCAGAGAAGCTGTTTGAT
GAAATGCTTGAGAGAGGAGTTAAGCCTGATAATATTACGTTTTCGACAATAATTAGCTGT
GCTAGGGTTAGTTCTCTGCCCAATAAGGCTGTGGAGTGGTTTGAGAAGATGCCTGAATTC
GGGTGTCATCCTGATGATGTTACCTACTCGGCCATGATCGATGCGTATGGACGAGCTGGC
AATGTTGATATGGCATTGAAATTGTATGATCGTGCACGAACAGAAAAATGGAGGATTGAT
CCGGTGACATTCTCGACATTGATTAGAATTTATGGGATGTCAGGAAATTTTGATGGGTGC
TTGAATGTGTATGAAGAGATGAAGGCTCTTGGAGTTAAGCCCAACTTGGTTATATATAAT
ACTTTGTTGGATGCTATGGGTAGAGCCAAGAGACCTTGGCAGGCGAAGAATATTTACAAA
GAGATGACCAACAATGGCCTCCAACCGAGTTGGGGAACTTATGCTGCCTTGTTACGGGCC
TATGGCAGAGCACGCTATGCTGAAGACGCTCTTATTGTGTACAAAGAGATGAAGGAGAAG
GGGTTGGAGTTGAGTGTGGTTCTTTATAATACTCTCTTAGCTATGTGTGCTGATGTTGGC
TACACTGAAGAAGCTGCTGCAATTTTTGAAGATATGAAGAGTTCTGGGAATTGCATGCCA
GACAGTTGGACATTTTCATCATTGATTACCATATATTCCTGTAGTGGGAAGGTCTCAGAG
GCAGAAGCCATGTTGAATGCAATGTTGGAAGCAGGTTTTGAGCCTAATATCTTTGTTTTG
ACATCACTTATTCAATGCTATGGGAAAGCCAATCGTACAGATGAGGTTGTTAGGACATTT
GACCGGCTTTTGGAATTAGACATAACTCCAGATGATCGTTTCTGTGGTTGTATGTTGAAT
GTGATGACCCAAAGTCCTAAGGAAGAACTTGGTAAGCTCATTGACTGCATTGACAAGGCT
AACCCAAAGCTTGGTAATGTGGTGAAACTTTTGCTGGAGGAGCAAAATGGGGAAGGGACT
TTTAGAAAAGAAGCATCTGAACTCTTTGATTCCATTAGCGCTGATGTAAAGAAGGCTTAC
TGCAATTGCTTAATTGATCTGTGTGTCAACCTCAATCTGTTGGAGAAAGCTTGTGAGCTG
TTTGACCTGGGGCTTACACTTGAGATATACATAGATATACAGTCTAAATCACCAACCCAA
TGGTCTTTACATTTGAAGAGCCTCTCCCTTGGGGCAGCTTTGACTGCGTTGCACATTTGG
ATGAATGACTTGTCCAAAGCAGTGGAGGTTGGGGAGGAGCTTCCGGCAGTGCTTGGAATC
AACACTGGACATGGAAAACACAAATACTCAGACAAAGGTTTAGCGAGTGTCTTTGAGTCC
CATTTGAAGGAACTAAATGCACCATTTCATGAGGCCCCAGATAAGGTTGGCTGGTTTCTA
ACAACAAAGGTTGCAGCCACATCATGGTTGGAGTCTAGAAGTGCACCTGAACTAGTTGCT
GTTTAG

Peptide Sequence

PEP ID

VIT_00s0194g00270.t01
PEP Infomation

pep chromosome:12X:Un:10731146:10733471:-1 gene:VIT_00s0194g00270 transcript:VIT_00s0194g00270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE
DPIPQETQKADASNPPNSQDPDRKTKSYIWVNPRSPRASKLRQHSYDARYASLVKIAESL
DSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREVILYN
VTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEKMPEF
GCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGC
LNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRA
YGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMP
DSWTFSSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTF
DRLLELDITPDDRFCGCMLNVMTQSPKEELGKLIDCIDKANPKLGNVVKLLLEEQNGEGT
FRKEASELFDSISADVKKAYCNCLIDLCVNLNLLEKACELFDLGLTLEIYIDIQSKSPTQ
WSLHLKSLSLGAALTALHIWMNDLSKAVEVGEELPAVLGINTGHGKHKYSDKGLASVFES
HLKELNAPFHEAPDKVGWFLTTKVAATSWLESRSAPELVAV

Transcript Sequence

Transcript ID

VIT_00s0194g00270.t01
Transcript Infomation

cdna chromosome:12X:Un:10731146:10733471:-1 gene:VIT_00s0194g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGCGAAGGAGAAAAATGGCTTACCATCTCTGCTCTTCGCCCTCCTCTCTCTGCCATGA
CCACCATTATCTCCACAACTCTCTTTCTTTCTCACGGAAATCAAGGCTGAGAAGCTTCAA
TAGCTTCTCTTTCAAACCCAATTCTCTCTCACTTCACTCAAGAACCTTTCTCCAAATCAC
CCATGTCTCTTTAGAGGACCCAATTCCACAAGAAACCCAGAAGGCAGATGCCTCAAATCC
ACCAAATTCTCAAGACCCAGATAGGAAAACCAAAAGTTACATCTGGGTCAACCCCAGAAG
CCCCAGAGCTTCGAAGCTTCGTCAGCACTCGTATGATGCCAGGTATGCTTCTCTAGTGAA
AATAGCCGAGTCTTTGGACTCGTGTGAGGCCACTGAGGAAGATGTTTCTCAGGTTTTGAG
GTGTTTAGGTGATAAGATATTAGAGCAGGACGCTGTGATTGTCCTCAACAACATGACGAA
CCCGGAAACGGCACTTCTTGCTTTTGGTTTCTTTCGGAAGAGATTGAAACCGAGCAGAGA
GGTGATTCTGTATAATGTGACCTTGAAGGTTTTTAGGAAGTGTAGGAACTTGGATAGAGC
AGAGAAGCTGTTTGATGAAATGCTTGAGAGAGGAGTTAAGCCTGATAATATTACGTTTTC
GACAATAATTAGCTGTGCTAGGGTTAGTTCTCTGCCCAATAAGGCTGTGGAGTGGTTTGA
GAAGATGCCTGAATTCGGGTGTCATCCTGATGATGTTACCTACTCGGCCATGATCGATGC
GTATGGACGAGCTGGCAATGTTGATATGGCATTGAAATTGTATGATCGTGCACGAACAGA
AAAATGGAGGATTGATCCGGTGACATTCTCGACATTGATTAGAATTTATGGGATGTCAGG
AAATTTTGATGGGTGCTTGAATGTGTATGAAGAGATGAAGGCTCTTGGAGTTAAGCCCAA
CTTGGTTATATATAATACTTTGTTGGATGCTATGGGTAGAGCCAAGAGACCTTGGCAGGC
GAAGAATATTTACAAAGAGATGACCAACAATGGCCTCCAACCGAGTTGGGGAACTTATGC
TGCCTTGTTACGGGCCTATGGCAGAGCACGCTATGCTGAAGACGCTCTTATTGTGTACAA
AGAGATGAAGGAGAAGGGGTTGGAGTTGAGTGTGGTTCTTTATAATACTCTCTTAGCTAT
GTGTGCTGATGTTGGCTACACTGAAGAAGCTGCTGCAATTTTTGAAGATATGAAGAGTTC
TGGGAATTGCATGCCAGACAGTTGGACATTTTCATCATTGATTACCATATATTCCTGTAG
TGGGAAGGTCTCAGAGGCAGAAGCCATGTTGAATGCAATGTTGGAAGCAGGTTTTGAGCC
TAATATCTTTGTTTTGACATCACTTATTCAATGCTATGGGAAAGCCAATCGTACAGATGA
GGTTGTTAGGACATTTGACCGGCTTTTGGAATTAGACATAACTCCAGATGATCGTTTCTG
TGGTTGTATGTTGAATGTGATGACCCAAAGTCCTAAGGAAGAACTTGGTAAGCTCATTGA
CTGCATTGACAAGGCTAACCCAAAGCTTGGTAATGTGGTGAAACTTTTGCTGGAGGAGCA
AAATGGGGAAGGGACTTTTAGAAAAGAAGCATCTGAACTCTTTGATTCCATTAGCGCTGA
TGTAAAGAAGGCTTACTGCAATTGCTTAATTGATCTGTGTGTCAACCTCAATCTGTTGGA
GAAAGCTTGTGAGCTGTTTGACCTGGGGCTTACACTTGAGATATACATAGATATACAGTC
TAAATCACCAACCCAATGGTCTTTACATTTGAAGAGCCTCTCCCTTGGGGCAGCTTTGAC
TGCGTTGCACATTTGGATGAATGACTTGTCCAAAGCAGTGGAGGTTGGGGAGGAGCTTCC
GGCAGTGCTTGGAATCAACACTGGACATGGAAAACACAAATACTCAGACAAAGGTTTAGC
GAGTGTCTTTGAGTCCCATTTGAAGGAACTAAATGCACCATTTCATGAGGCCCCAGATAA
GGTTGGCTGGTTTCTAACAACAAAGGTTGCAGCCACATCATGGTTGGAGTCTAGAAGTGC
ACCTGAACTAGTTGCTGTTTAGGTGTGTAATGCTGACTAGGGTTTTATATTGAATTAGTA
CTCATCTGAACCAGCATTCTATGGGAACAGTAGACAAGCTATCTCATATTTCCTCCTCCC
TAAGATTTTGGCCATATCTAAGAGAAAAATTTTGTACTACTAGATACAAAATGCATTCAT
GATTTGCTGAAGTGTTGTTAACTTAGATTTACTTAAATATATAATA