Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0194g00080.t01
CDS Infomation

cds chromosome:12X:Un:10586711:10589305:-1 gene:VIT_00s0194g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGTTCATGAAACTTGGCACAAGGCCTGACACTTTCTATACAGAAGAGGCTACCAGG
ACGGTGAGCTCAGATGTGCCTAGCGATCTCGTCATTCGAATCAACAACATCACTTATCTT
CTCCATAAGTTTCCACTTCTTCCAAAGTGCGGTCTCTTGCAAAGGCTCTTGACCGATTCT
GGTGATTCGGACAATGACTCTGTAGAGCTTCATGATATTCCTGGAGGTGAAGATGCTTTT
GAGCTGTGTGCTAAGTTCTGCTATGGAATCACTATTAATCTCAGCGCCCATAACTTTGTG
CGAGCATTCTGTGCTGCTAAGTTCCTTCGGATGACTGAATCGGTTGAGAAGGGGAACTTT
GTTTTGAAACTGGAGGCTTTCTTCAATTCATGCATTCTTGAAGGGTGGAAGGACTCCGTT
GTCGCACTGCAGAGCACTGGAAAGATGATTGAGTGGTCAGAAAATCTTGGGATCACAAGG
AGGTGCATCGATTCAATTGTTGAGAAAATCCTAACCCCCCCAGCAAAGGTAAACTGGTCC
TTCACTTACAGCAGACCTGGGTATAACAAAAAACGTCACCAATCTGTTCCAAGGGATTGG
TGGACGGAGGACATATCAGACCTTGACATAGACCTCTTTCGGTTCATAGTTACTGCCCTC
AGGTCAACAAATATGGTGCAACCACAGCTGATTGGTGAAGCATTGCACGTCTATGCCTCC
CGTTGGCTACCAGACACTACAAAGATTAGGCCTCCAGAGAGTTCAGCGTCTCTAGCCAAC
GAACCAGTGGAGAAGAACAGGCGAGTCCTTGAGACCATTGTGAGCATGATTCCAGCAGAC
CGAGGATCAGTTTCAGTTAACTTCTTGCTAAGGCTCCTCAGCACAGCAAGTTATCTGGGG
GCGTCTCCAGTGACAAAGACAGAACTCATACGGAGATGTGGTTTACAACTTGATGAGGTG
ACAGTAGACGACTTGCTGCTTCCTTCTCACTTGTCTTCTGATCAGTACTGTTACGATATT
GACATGATTTCCGTAGTGCTTGAAAGTTTCTTGGTGCTATGGAGAATACAATACCCTGCA
CCTTCTCAAGACAGCCAGTTCATGAGATCGATTAGAAAGGTCGGGAAGGTTATTGATTGT
TACCTTCAAGTGGCTGCAAAGGATGCCAACATGCCAGTGATGAAATTCATATCTCTTGCC
GAAGCTCTGCCAGATACTGCACGGCCAAAGCATGATGACCTGTATAAGGCAATCAACATT
TATCTCAAGGAGCATCCTGATCTGAACAAAGCAGAGAAGAAGCGTCTTTGCCGGATTCTG
GACTGCCAGAAACTGTCCCCAGACGTATGCGCCCATGCTGTGAAGAATGAACGTCTACCA
TTAAGAACAGTGGTGCAAGTGCTCTTCTTCGACCAAGAGAGAGGTTTCAAGGCAACCAGC
CAAAAACTGCCGCCCCGGGGGCTTCTCTCCAGGGCACAAGAGGCACCATTCAGTGAAACT
GTCCAAAGTAAACCAAAGTTACCTCCAGATGATCGCGCCAATAGACAGGAGGGCACCAGA
AGAGCCCCAAGTCCCGCCATCCCTGAAAGAGACCAGCACAAAAAGTTACACCTCAAATCA
GAAAGAAACATTGTAATTAGCAGAGAACCGGGGGAAGTAGAGTCAGAGAAGGTAAGGGAA
ACCAGAGAAGAAGGAATATCAGGAAGCAAGATGAATCCAAGGAAGACAATGCAGGGAAAG
AGTTCATCAGACCATGGCCATTACAAAGGTAGAGACAGGTAG

Peptide Sequence

PEP ID

VIT_00s0194g00080.t01
PEP Infomation

pep chromosome:12X:Un:10586711:10589305:-1 gene:VIT_00s0194g00080 transcript:VIT_00s0194g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKFMKLGTRPDTFYTEEATRTVSSDVPSDLVIRINNITYLLHKFPLLPKCGLLQRLLTDS
GDSDNDSVELHDIPGGEDAFELCAKFCYGITINLSAHNFVRAFCAAKFLRMTESVEKGNF
VLKLEAFFNSCILEGWKDSVVALQSTGKMIEWSENLGITRRCIDSIVEKILTPPAKVNWS
FTYSRPGYNKKRHQSVPRDWWTEDISDLDIDLFRFIVTALRSTNMVQPQLIGEALHVYAS
RWLPDTTKIRPPESSASLANEPVEKNRRVLETIVSMIPADRGSVSVNFLLRLLSTASYLG
ASPVTKTELIRRCGLQLDEVTVDDLLLPSHLSSDQYCYDIDMISVVLESFLVLWRIQYPA
PSQDSQFMRSIRKVGKVIDCYLQVAAKDANMPVMKFISLAEALPDTARPKHDDLYKAINI
YLKEHPDLNKAEKKRLCRILDCQKLSPDVCAHAVKNERLPLRTVVQVLFFDQERGFKATS
QKLPPRGLLSRAQEAPFSETVQSKPKLPPDDRANRQEGTRRAPSPAIPERDQHKKLHLKS
ERNIVISREPGEVESEKVRETREEGISGSKMNPRKTMQGKSSSDHGHYKGRDR

Transcript Sequence

Transcript ID

VIT_00s0194g00080.t01
Transcript Infomation

cdna chromosome:12X:Un:10586711:10589305:-1 gene:VIT_00s0194g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGGATAATTGGAAAGGGAATGTCTCAGTTGTATGAAGTAGTAGGTGGAAGAAAAGAGA
GTCACAAAGATGAAGTTCATGAAACTTGGCACAAGGCCTGACACTTTCTATACAGAAGAG
GCTACCAGGACGGTGAGCTCAGATGTGCCTAGCGATCTCGTCATTCGAATCAACAACATC
ACTTATCTTCTCCATAAGTTTCCACTTCTTCCAAAGTGCGGTCTCTTGCAAAGGCTCTTG
ACCGATTCTGGTGATTCGGACAATGACTCTGTAGAGCTTCATGATATTCCTGGAGGTGAA
GATGCTTTTGAGCTGTGTGCTAAGTTCTGCTATGGAATCACTATTAATCTCAGCGCCCAT
AACTTTGTGCGAGCATTCTGTGCTGCTAAGTTCCTTCGGATGACTGAATCGGTTGAGAAG
GGGAACTTTGTTTTGAAACTGGAGGCTTTCTTCAATTCATGCATTCTTGAAGGGTGGAAG
GACTCCGTTGTCGCACTGCAGAGCACTGGAAAGATGATTGAGTGGTCAGAAAATCTTGGG
ATCACAAGGAGGTGCATCGATTCAATTGTTGAGAAAATCCTAACCCCCCCAGCAAAGGTA
AACTGGTCCTTCACTTACAGCAGACCTGGGTATAACAAAAAACGTCACCAATCTGTTCCA
AGGGATTGGTGGACGGAGGACATATCAGACCTTGACATAGACCTCTTTCGGTTCATAGTT
ACTGCCCTCAGGTCAACAAATATGGTGCAACCACAGCTGATTGGTGAAGCATTGCACGTC
TATGCCTCCCGTTGGCTACCAGACACTACAAAGATTAGGCCTCCAGAGAGTTCAGCGTCT
CTAGCCAACGAACCAGTGGAGAAGAACAGGCGAGTCCTTGAGACCATTGTGAGCATGATT
CCAGCAGACCGAGGATCAGTTTCAGTTAACTTCTTGCTAAGGCTCCTCAGCACAGCAAGT
TATCTGGGGGCGTCTCCAGTGACAAAGACAGAACTCATACGGAGATGTGGTTTACAACTT
GATGAGGTGACAGTAGACGACTTGCTGCTTCCTTCTCACTTGTCTTCTGATCAGTACTGT
TACGATATTGACATGATTTCCGTAGTGCTTGAAAGTTTCTTGGTGCTATGGAGAATACAA
TACCCTGCACCTTCTCAAGACAGCCAGTTCATGAGATCGATTAGAAAGGTCGGGAAGGTT
ATTGATTGTTACCTTCAAGTGGCTGCAAAGGATGCCAACATGCCAGTGATGAAATTCATA
TCTCTTGCCGAAGCTCTGCCAGATACTGCACGGCCAAAGCATGATGACCTGTATAAGGCA
ATCAACATTTATCTCAAGGAGCATCCTGATCTGAACAAAGCAGAGAAGAAGCGTCTTTGC
CGGATTCTGGACTGCCAGAAACTGTCCCCAGACGTATGCGCCCATGCTGTGAAGAATGAA
CGTCTACCATTAAGAACAGTGGTGCAAGTGCTCTTCTTCGACCAAGAGAGAGGTTTCAAG
GCAACCAGCCAAAAACTGCCGCCCCGGGGGCTTCTCTCCAGGGCACAAGAGGCACCATTC
AGTGAAACTGTCCAAAGTAAACCAAAGTTACCTCCAGATGATCGCGCCAATAGACAGGAG
GGCACCAGAAGAGCCCCAAGTCCCGCCATCCCTGAAAGAGACCAGCACAAAAAGTTACAC
CTCAAATCAGAAAGAAACATTGTAATTAGCAGAGAACCGGGGGAAGTAGAGTCAGAGAAG
GTAAGGGAAACCAGAGAAGAAGGAATATCAGGAAGCAAGATGAATCCAAGGAAGACAATG
CAGGGAAAGAGTTCATCAGACCATGGCCATTACAAAGGTAGAGACAGGTAGTAAGCGAAG
AAGAAACATCTCATGGTGCCCTCTGCACTCACTGTAATTCTATTTTTTTCTGTAACCATC
TAGCATAAAGTGTTTGATTCCAAAACCATTTTCTCATTACCTGTGGGGACTGTCCAATAA
AGGATAGAGATGGATTGTGATTTATGCACTGTGATTTCAGTGGGGAACATTGTCATGCCC
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