Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0187g00350.t01
CDS Infomation

cds chromosome:12X:Un:9260181:9277500:1 gene:VIT_00s0187g00350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGTTTGATCTGATGTTGAAGCCCTCATGCAGCGGCTGTGGATCCACCACGGATTTG
TACGGAAGCAACTGCAAGCACATGACTCTCTGCTTGTCGTGTGGCAAAACCATGGCAGAG
AACCACGGGAAATGCTACGACTGTGGCACCCCTGTCACTCGATTGATTAGGGAATACAAT
GTTCGGACGAATTCCAGCGGCGATAAGAATTACTTCATTGGTAGGTTTGTGACTGGTTTG
CCGGGTTTTTCAAAGAAGAAAAATGCTGATAATAAATGGTCTCTGCATAAAGAGGGGCTT
CAAGGACGCCAAGTTTCTGATGCTTTGCGGGAGAAGTACAAGAATAAACCTTGGCTCTTG
GAGGATGAAACAGGTCAATATCAGTATCATGGTCAGCTTGAGGGTTCACAATCAGCAACT
TACTACCTACTAATGATGCAAGGAAAGGAATTTGTTGCTATTCCAGCTGGATCTTGGTAC
AACTTTAACAAAGTTGCTCAGTATAAGCAACTCACCTTGGAGGAAGCAGAAGAGAAGATG
AAGAATAGGAGGAGGACTGCAGATGGATATCAAAGATGGATGATGAAGGCAGCAAATAAT
GGACCTGCTGCATTTGGTGAAGTGGAGAAGCTTGATGACAAGGAGACTGGTGGTGCAGCT
GGTGGTGGGAGGGGACGTAAAAAACAAACTGGTGATGAAGAAGAAGGTAATGTCTCGGAT
AAGGCAGAGGAAGATGAAGAAGAAGAGGCAGAAAGGAAGAACAGACTTGGACTTAACAAA
AGAAGTGGTGATGACGATGAAGAAGGTCCAAGAGGTGGTGATCATGATTTAGATGATGAT
GATATTGAGAAGGGTGATGATTGGGAGCATGAAGAAATTTTCACTGATGACGATGAAGCT
GTTGGTAATGATCCTGAGGAACGGGAAGATTTGGCACCCGAAGTTCCTGCACCTCCAGAA
ATAAAGCAGGATGAAGAGGACGAAGATGATTCTAATGAAGAGGAGGGAGGATTAAGCAAA
TCTGGAAAGGAGTTGAAAAAACTGCTTGGAAAAGCTGCTGGAATGAATGATTCGGATGCA
GAGGATGACGATGACGATGAAGAAGAAGATGAGATTGGCCTTTCTCCTGTGCTGGCTCCA
AAACAGAAGGATGTACCTAAAGAAGAGCCTGCTGATAACAGTCCTATGAAATCAGCTACT
GCTTCTGCTCGGTCAACACCACCTACTTCAAAATCATCAAAAGGGAAGAGAAAGTCAAAT
GGTGATGACATGAAAACAACTAATGGTGGACCTCCAAAGAAGGTGAAGACAGAAAATGAA
TCAAAATCTTCTGCAAAAGATGAAGGCCCATCTCCTTCTAAAGTTACTGCAACTCCAAAG
GGAACGCCATCATCATCTGTGAAAACTGGATCAACATCGTCAGCTGGACCAGTCACAGAA
GATGAAATCAGGGCTGTTTTATTGCAGAAGGCACCTGTGACCACTCAGGATCTTGTCGCC
AAATTTAAAGCCAGACTGAAATCCCAAGAGGATAAGAAGGCTTTTGCTGATATACTGAGG
AGAATCTCTAAGATACAAAAGACTAATGGACCTAACTATGTTGTGTTGAGAGATAAATGA

Peptide Sequence

PEP ID

VIT_00s0187g00350.t01
PEP Infomation

pep chromosome:12X:Un:9260181:9277500:1 gene:VIT_00s0187g00350 transcript:VIT_00s0187g00350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSFDLMLKPSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYN
VRTNSSGDKNYFIGRFVTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLL
EDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSD
KAEEDEEEEAERKNRLGLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEA
VGNDPEEREDLAPEVPAPPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDA
EDDDDDEEEDEIGLSPVLAPKQKDVPKEEPADNSPMKSATASARSTPPTSKSSKGKRKSN
GDDMKTTNGGPPKKVKTENESKSSAKDEGPSPSKVTATPKGTPSSSVKTGSTSSAGPVTE
DEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK

Transcript Sequence

Transcript ID

VIT_00s0187g00350.t01
Transcript Infomation

cdna chromosome:12X:Un:9260181:9277500:1 gene:VIT_00s0187g00350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACGGACTCAACTCTTTCAGACATCCCCAAATCCATAGAAAGAAACTGTCTTCGGAAAAT
TTAATCGATCATAGCTCTGAATCCGACTGAACCCTACGTGAATTTAAAGGAGGAGAAATG
TCGTTTGATCTGATGTTGAAGCCCTCATGCAGCGGCTGTGGATCCACCACGGATTTGTAC
GGAAGCAACTGCAAGCACATGACTCTCTGCTTGTCGTGTGGCAAAACCATGGCAGAGAAC
CACGGGAAATGCTACGACTGTGGCACCCCTGTCACTCGATTGATTAGGGAATACAATGTT
CGGACGAATTCCAGCGGCGATAAGAATTACTTCATTGGTAGGTTTGTGACTGGTTTGCCG
GGTTTTTCAAAGAAGAAAAATGCTGATAATAAATGGTCTCTGCATAAAGAGGGGCTTCAA
GGACGCCAAGTTTCTGATGCTTTGCGGGAGAAGTACAAGAATAAACCTTGGCTCTTGGAG
GATGAAACAGGTCAATATCAGTATCATGGTCAGCTTGAGGGTTCACAATCAGCAACTTAC
TACCTACTAATGATGCAAGGAAAGGAATTTGTTGCTATTCCAGCTGGATCTTGGTACAAC
TTTAACAAAGTTGCTCAGTATAAGCAACTCACCTTGGAGGAAGCAGAAGAGAAGATGAAG
AATAGGAGGAGGACTGCAGATGGATATCAAAGATGGATGATGAAGGCAGCAAATAATGGA
CCTGCTGCATTTGGTGAAGTGGAGAAGCTTGATGACAAGGAGACTGGTGGTGCAGCTGGT
GGTGGGAGGGGACGTAAAAAACAAACTGGTGATGAAGAAGAAGGTAATGTCTCGGATAAG
GCAGAGGAAGATGAAGAAGAAGAGGCAGAAAGGAAGAACAGACTTGGACTTAACAAAAGA
AGTGGTGATGACGATGAAGAAGGTCCAAGAGGTGGTGATCATGATTTAGATGATGATGAT
ATTGAGAAGGGTGATGATTGGGAGCATGAAGAAATTTTCACTGATGACGATGAAGCTGTT
GGTAATGATCCTGAGGAACGGGAAGATTTGGCACCCGAAGTTCCTGCACCTCCAGAAATA
AAGCAGGATGAAGAGGACGAAGATGATTCTAATGAAGAGGAGGGAGGATTAAGCAAATCT
GGAAAGGAGTTGAAAAAACTGCTTGGAAAAGCTGCTGGAATGAATGATTCGGATGCAGAG
GATGACGATGACGATGAAGAAGAAGATGAGATTGGCCTTTCTCCTGTGCTGGCTCCAAAA
CAGAAGGATGTACCTAAAGAAGAGCCTGCTGATAACAGTCCTATGAAATCAGCTACTGCT
TCTGCTCGGTCAACACCACCTACTTCAAAATCATCAAAAGGGAAGAGAAAGTCAAATGGT
GATGACATGAAAACAACTAATGGTGGACCTCCAAAGAAGGTGAAGACAGAAAATGAATCA
AAATCTTCTGCAAAAGATGAAGGCCCATCTCCTTCTAAAGTTACTGCAACTCCAAAGGGA
ACGCCATCATCATCTGTGAAAACTGGATCAACATCGTCAGCTGGACCAGTCACAGAAGAT
GAAATCAGGGCTGTTTTATTGCAGAAGGCACCTGTGACCACTCAGGATCTTGTCGCCAAA
TTTAAAGCCAGACTGAAATCCCAAGAGGATAAGAAGGCTTTTGCTGATATACTGAGGAGA
ATCTCTAAGATACAAAAGACTAATGGACCTAACTATGTTGTGTTGAGAGATAAATGAAGG
GTTGCAGGCTGTTTCTGACCCCCCAGCTTCAACGAAATTGAGTGGCAGGTGATGCTCATC
CTCTCTGTCGCACAAATAAAACATGAAAAAAATGCAAAAAAAAGCCCTAGGACCACCTTT
TGTACCAACTCTATCTTGAAACTGTACTGGTTCATGCCTGTTTTTGAAGTGGATTAAAAC
GAGGGTATCATGTATTAAATCATCATATTGGGAATCATTCACATACAAACAATGCTCTGT
AGGGGGTCCAGTATTGATCGTTCTGCTACCTGATCATGAAGCCACTAAAACATGAAAAAG
GGCATAGGACCACCTCCTGTT