Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0187g00340.t01
CDS Infomation

cds chromosome:12X:Un:9248128:9253019:-1 gene:VIT_00s0187g00340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCTCCAGTCTTTCGTCGAAGTTCACCCTGACTCTCACTTCCCCATCCAGAACCTT
CCGTACGGTGTTTTCCGGCCTGGACCGTCTGCGGAGGCTCGGCCTGGCGTGGCGATCGGA
GACTATGTGTTGGATCTCTCGGTGGTTCAGTCCGCCGGTCTGTTCGACGGTCCGATTGTC
GGAAAATCCGATTGTTTCCTGCAGCCGAATCTCAACAAGTTCTTGGGAATGAGGCGGCCT
GCATGGAAGGAAGCTCGATCGACACTTCAAAAGCTGCTGTCATCTACAGAACCAACACTG
CGTGACAATGCAAGCTTGAGGGAAAAAGCACTTGTACCAATGAACAAGGTAGAAATGTGT
CTTCCTATGGTGATAGGGGACTATTCAGACTTCTTTTCGTCCATGCATCATGCAAGGAAC
TGTGGGAGCATATTTCGTGGACCAGAGGACCCGATTGGAGCAAACTGGTTCCACCTTCCT
ATTGCTTATCATGGGCGGGCATCGTCTATTGTTATATCTGGAACTGATCTTATTCGGCCA
AAAGGCCAAGGTCATCCAATTGGCAATTCACCATATTTTGGACCTTCAAGAAAGCTAGAC
TTTGAGCTAGAAATGGCTGCTATAGTTGGTCCTGGTAATGAATTAGGAAAGCCTGTGGAT
GTTAATGAGGCTGCAGATCATATCTTTGGACTTGTGATCATGAATGACTGGAGTGCAAGA
GATATTCAGGCATGGGAATATGTGCCTCTTGGGCCTTTTCTTGGGAAGAGTTTTGGTACA
ACACTATCCCCTTGGATTGTGACCCTTGATGCTCTAGAGCCCTTTGCTTGTGATGCTCCA
AAACAGGACCCTCCTCCCTTGCCGTATCTGGCTGAAAAAATATCCCAAAACTATGACATT
TCCTTAGAGGTTGGGATTAAACCTGCTGGACATAAAAATTCGTGCATTGTCACAAGGAGT
AACTTAAAGCACTTATATTGGACACTGACTCAACAACTTGCACACCATACAATCAATGGT
TGCAACTTAAGGCCAGGCGATCTCCTTGGAACTGGAACCATAAGTGGACCTGAACCGGAA
TCTTTGGGATGCTTGCTAGAATTAACATGGAATGGACAAAAGCCAGTATCTTTGGATGGA
ACAACCCGTGGATTTCTTGAAGATGGAGATGAAGTCACTATCACTGGTTATTGCAAGGGC
AATGGTTACAAAGTTGGGTTCGGAACATGCTCAGGCAAGATTCTTCCATCATCTCCTTGA

Peptide Sequence

PEP ID

VIT_00s0187g00340.t01
PEP Infomation

pep chromosome:12X:Un:9248128:9253019:-1 gene:VIT_00s0187g00340 transcript:VIT_00s0187g00340.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALQSFVEVHPDSHFPIQNLPYGVFRPGPSAEARPGVAIGDYVLDLSVVQSAGLFDGPIV
GKSDCFLQPNLNKFLGMRRPAWKEARSTLQKLLSSTEPTLRDNASLREKALVPMNKVEMC
LPMVIGDYSDFFSSMHHARNCGSIFRGPEDPIGANWFHLPIAYHGRASSIVISGTDLIRP
KGQGHPIGNSPYFGPSRKLDFELEMAAIVGPGNELGKPVDVNEAADHIFGLVIMNDWSAR
DIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDAPKQDPPPLPYLAEKISQNYDI
SLEVGIKPAGHKNSCIVTRSNLKHLYWTLTQQLAHHTINGCNLRPGDLLGTGTISGPEPE
SLGCLLELTWNGQKPVSLDGTTRGFLEDGDEVTITGYCKGNGYKVGFGTCSGKILPSSP

Transcript Sequence

Transcript ID

VIT_00s0187g00340.t01
Transcript Infomation

cdna chromosome:12X:Un:9248128:9253019:-1 gene:VIT_00s0187g00340 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAATCACTTCACATACCTCTCAAAGCATCACTAATCGCACTACTTCAGCGCTCTGCTTTC
TCTGGACACCGAGACGACGTCGTTTTACAGCAGCCATGGCTCTCCAGTCTTTCGTCGAAG
TTCACCCTGACTCTCACTTCCCCATCCAGAACCTTCCGTACGGTGTTTTCCGGCCTGGAC
CGTCTGCGGAGGCTCGGCCTGGCGTGGCGATCGGAGACTATGTGTTGGATCTCTCGGTGG
TTCAGTCCGCCGGTCTGTTCGACGGTCCGATTGTCGGAAAATCCGATTGTTTCCTGCAGC
CGAATCTCAACAAGTTCTTGGGAATGAGGCGGCCTGCATGGAAGGAAGCTCGATCGACAC
TTCAAAAGCTGCTGTCATCTACAGAACCAACACTGCGTGACAATGCAAGCTTGAGGGAAA
AAGCACTTGTACCAATGAACAAGGTAGAAATGTGTCTTCCTATGGTGATAGGGGACTATT
CAGACTTCTTTTCGTCCATGCATCATGCAAGGAACTGTGGGAGCATATTTCGTGGACCAG
AGGACCCGATTGGAGCAAACTGGTTCCACCTTCCTATTGCTTATCATGGGCGGGCATCGT
CTATTGTTATATCTGGAACTGATCTTATTCGGCCAAAAGGCCAAGGTCATCCAATTGGCA
ATTCACCATATTTTGGACCTTCAAGAAAGCTAGACTTTGAGCTAGAAATGGCTGCTATAG
TTGGTCCTGGTAATGAATTAGGAAAGCCTGTGGATGTTAATGAGGCTGCAGATCATATCT
TTGGACTTGTGATCATGAATGACTGGAGTGCAAGAGATATTCAGGCATGGGAATATGTGC
CTCTTGGGCCTTTTCTTGGGAAGAGTTTTGGTACAACACTATCCCCTTGGATTGTGACCC
TTGATGCTCTAGAGCCCTTTGCTTGTGATGCTCCAAAACAGGACCCTCCTCCCTTGCCGT
ATCTGGCTGAAAAAATATCCCAAAACTATGACATTTCCTTAGAGGTTGGGATTAAACCTG
CTGGACATAAAAATTCGTGCATTGTCACAAGGAGTAACTTAAAGCACTTATATTGGACAC
TGACTCAACAACTTGCACACCATACAATCAATGGTTGCAACTTAAGGCCAGGCGATCTCC
TTGGAACTGGAACCATAAGTGGACCTGAACCGGAATCTTTGGGATGCTTGCTAGAATTAA
CATGGAATGGACAAAAGCCAGTATCTTTGGATGGAACAACCCGTGGATTTCTTGAAGATG
GAGATGAAGTCACTATCACTGGTTATTGCAAGGGCAATGGTTACAAAGTTGGGTTCGGAA
CATGCTCAGGCAAGATTCTTCCATCATCTCCTTGAGGAAAATGTTGGCCCTGGTGATCAG
AATAAGTGCTCGTTTCTCACTTTACCTCAAACTTGGGTTGAACAATTGTAGAGCCTAGAA
TTTCATGCACAGTTTTTTGCTATTGTTTTAGTGAACTGAAGTACATGTCGTATCTTGGCC
AGGGGCTAGAAATCTTCTT