Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0187g00240.t01
CDS Infomation

cds chromosome:12X:Un:9167334:9171675:-1 gene:VIT_00s0187g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGTCGGATCAAGATATCGCGAAAGGTGTGGAGACACTGCTCCGTCAGTCTGAGCCC
AACTCATTCACCTCCTTAAACGGCGTCGTTAAGCAGCTGGAAGCCAAACTAGGGCTCGAC
CTGTCCCATAAGGCTGTCTTCATCAGAGACCAGATCAGTTTCCTGCTCCGGTCTCACCCT
CAGCCCCTTCCCCCAAAAGACCATTTTGCCCTCCAGCAACACCCCCAATTCCTCAGTCCC
CACCCCCAAATCCCTTCCCATTTTGCCCTTCAGCACCACCGCCCACCGCCGGAAGACCTC
AACTTCCTGTACCCCCTCCCCCAGCCTCAGCAGCATCAGCCGCAGACGCAGCCGCAGCCG
CAGCCGCATCACCTGCCGAAAGGTGAAGCCTTTCTGCAGAATGCAGCTAGTGTCGCCGCC
CAAGCGCCCAAAGAAAGTGCTCCAGCTGCACCCAAAAGAAGAGGCGGCTCGGGGGGTCTA
AACAAAGTCTGTGGGGTTTCAACTGAACTTCAGGCTGTTGTTGGCGAGCCAACCATGCCA
AGGACACAGATTGTGAAGCAGCTTTGGGCATACATTAGGAAAAACAACCTCCAAGATCCT
AGTAACAAGCGAAAGATAATTTGTGATGATGCCCTCCGCTTGGTGTTCGAGACAGATTCT
ACTGATATGTTCAAGATGAATAAGTTGCTTGCTAAACATATCATTCCGCTTGAACCTTCA
AGAGAATCCAGTCAAGCTAAACGGTTGAAGGTGGATGTTGAGTCTGCAACTGAAAGTAGT
GAAGCCAGTCCATCTCCTGTAATGATATCTGATGCACTTGCCACATTTTTTGGTACTGGA
GAAAGGGAGATGCTCCAAGAAGAGGCCCTAAGGCGTGTTTGGGAGTACATAAAGGTCAAC
CAATTAGAGGATCCTCTAAATTCAATGGCAATACTATGTGATGCAAAGCTTCGGGAGCTC
TTTGGATGTGAAAGTATTTCTGCACTGGGGGTATCTGAGATGTTAGCACGCCATCATTTG
TTCAAGCGATCTTGA

Peptide Sequence

PEP ID

VIT_00s0187g00240.t01
PEP Infomation

pep chromosome:12X:Un:9167334:9171675:-1 gene:VIT_00s0187g00240 transcript:VIT_00s0187g00240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVSDQDIAKGVETLLRQSEPNSFTSLNGVVKQLEAKLGLDLSHKAVFIRDQISFLLRSHP
QPLPPKDHFALQQHPQFLSPHPQIPSHFALQHHRPPPEDLNFLYPLPQPQQHQPQTQPQP
QPHHLPKGEAFLQNAASVAAQAPKESAPAAPKRRGGSGGLNKVCGVSTELQAVVGEPTMP
RTQIVKQLWAYIRKNNLQDPSNKRKIICDDALRLVFETDSTDMFKMNKLLAKHIIPLEPS
RESSQAKRLKVDVESATESSEASPSPVMISDALATFFGTGEREMLQEEALRRVWEYIKVN
QLEDPLNSMAILCDAKLRELFGCESISALGVSEMLARHHLFKRS

Transcript Sequence

Transcript ID

VIT_00s0187g00240.t01
Transcript Infomation

cdna chromosome:12X:Un:9167334:9171675:-1 gene:VIT_00s0187g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGGAGAGAGACAGAGAGAAGGGAGAGAACCGTTGGAGAGTCCGTTTTTTCGGTTAATA
TATGAAGGTGAAGCTATGGTGTCGGATCAAGATATCGCGAAAGGTGTGGAGACACTGCTC
CGTCAGTCTGAGCCCAACTCATTCACCTCCTTAAACGGCGTCGTTAAGCAGCTGGAAGCC
AAACTAGGGCTCGACCTGTCCCATAAGGCTGTCTTCATCAGAGACCAGATCAGTTTCCTG
CTCCGGTCTCACCCTCAGCCCCTTCCCCCAAAAGACCATTTTGCCCTCCAGCAACACCCC
CAATTCCTCAGTCCCCACCCCCAAATCCCTTCCCATTTTGCCCTTCAGCACCACCGCCCA
CCGCCGGAAGACCTCAACTTCCTGTACCCCCTCCCCCAGCCTCAGCAGCATCAGCCGCAG
ACGCAGCCGCAGCCGCAGCCGCATCACCTGCCGAAAGGTGAAGCCTTTCTGCAGAATGCA
GCTAGTGTCGCCGCCCAAGCGCCCAAAGAAAGTGCTCCAGCTGCACCCAAAAGAAGAGGC
GGCTCGGGGGGTCTAAACAAAGTCTGTGGGGTTTCAACTGAACTTCAGGCTGTTGTTGGC
GAGCCAACCATGCCAAGGACACAGATTGTGAAGCAGCTTTGGGCATACATTAGGAAAAAC
AACCTCCAAGATCCTAGTAACAAGCGAAAGATAATTTGTGATGATGCCCTCCGCTTGGTG
TTCGAGACAGATTCTACTGATATGTTCAAGATGAATAAGTTGCTTGCTAAACATATCATT
CCGCTTGAACCTTCAAGAGAATCCAGTCAAGCTAAACGGTTGAAGGTGGATGTTGAGTCT
GCAACTGAAAGTAGTGAAGCCAGTCCATCTCCTGTAATGATATCTGATGCACTTGCCACA
TTTTTTGGTACTGGAGAAAGGGAGATGCTCCAAGAAGAGGCCCTAAGGCGTGTTTGGGAG
TACATAAAGGTCAACCAATTAGAGGATCCTCTAAATTCAATGGCAATACTATGTGATGCA
AAGCTTCGGGAGCTCTTTGGATGTGAAAGTATTTCTGCACTGGGGGTATCTGAGATGTTA
GCACGCCATCATTTGTTCAAGCGATCTTGATGTTTGGTCATGTTGACTGGTGGAGGGGGG
TGTTGCATTGTGGTTACTTGTGATGGTATGACACACACTGAAGAAGTCTTTTGTTCCTCT
TTTTTTTTGTGCATCAACATGTTTAGGTGTAAACTTGGTTGTTTCTAATTAGAATGAAAA
TGTACTTGGGCTAGTGGTAGGGAATATCTTGTCTTTATGCCCTGATCTTGGGTTTGGGTT
TTTTCTCTGTCATCTTTGGTCACTTTCTCGTGCCAATGCCTAACCACAATGGAATGTTTA
ACACCTCTAACATCCTGGTAGTGATGAATATATGATATTACATGCCAGGAGCTGTTCTGT
TTCAATTAGCACATGAAGGCAGTTGGTTTTTCAGCATGGA