Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0186g00090.t01
CDS Infomation

cds chromosome:12X:Un:8876296:8878488:1 gene:VIT_00s0186g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACCCGTCCACACTCCGAGATCGGCTTAGAACCAGAGAGGACGACGACGGCAGAGAT
GCTTGGGCCGGACTGACCCTCGGCGCCGTGTTGGGCTGCGAGAAGCGGCCTCCGCCGGGC
CACATCAACCGAACCCTCCTGGACATTATCAGAGACGAGTCCACCGGTTACAAAGACGTT
CTTGGCCAGCCCAACAACAACAACAACAAGATGAGCTGGAAGTCCTTCAAGGATCGCCTC
CGGATCCGCCGCGCTGGAGCCGCCTGGACCTCCTCCATGCCGATCCCAGCCTCTGACGTC
CCCACCAGAAGCCAGCTCTCCCGCCGCCAGTCCACTCGGGTTACGATGTACACCACCGAT
CCGCCGGAGCCGACGGAGACCTTCGAAGAATCTCCTGGGACGCCGGAGAACCCCCTCCCC
GTCGAGGCCGTCCAAGTCCATAACTTAAGGCCTCAGTTTTCACGGAACAATTCCATTCGT
GCTCCGTCCCGGACGTTCAGCCGAGCCGACTCCACTCGCTTGCACACCGGAGTCACGGAT
GGGCCGGTGGTCTCGCGCCGGCTGTCGGCGGCATTGGCAGAAGAGCGAGAATTGCAAAGG
GCAGAATCTGCGGCAGCTCTGGGAGGTGATGATGATGAGGCAGGGGAAGAAGAGGATGAA
GGGGAGGGGGAGGAGGAGGGGCCAGAGGCAGCACCGAGGATGTCGCTGATGGCATTATTA
GAAGAAACAGACAGGCAGGCGGGAATAGTGGGACCCGCATACGTATTAGAAGAAGAAGAA
GATGAGGATGAAGAGGAAGAAGCGGGCAGCGGAGGAGGAATAGAATACAACTGCTGCGTG
TGCATGGTGAGGCACAAGGGGGCTGCCTTCATACCCTGTGGACACACATTTTGCAGGCTG
TGTTCCAGGGAGCTGTGGGTGAGCAGGGGTAACTGCCCTCTCTGCAATGGCTTCATCTTG
GAAATCCTCGATATCTTTTAG

Peptide Sequence

PEP ID

VIT_00s0186g00090.t01
PEP Infomation

pep chromosome:12X:Un:8876296:8878488:1 gene:VIT_00s0186g00090 transcript:VIT_00s0186g00090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDPSTLRDRLRTREDDDGRDAWAGLTLGAVLGCEKRPPPGHINRTLLDIIRDESTGYKDV
LGQPNNNNNKMSWKSFKDRLRIRRAGAAWTSSMPIPASDVPTRSQLSRRQSTRVTMYTTD
PPEPTETFEESPGTPENPLPVEAVQVHNLRPQFSRNNSIRAPSRTFSRADSTRLHTGVTD
GPVVSRRLSAALAEERELQRAESAAALGGDDDEAGEEEDEGEGEEEGPEAAPRMSLMALL
EETDRQAGIVGPAYVLEEEEDEDEEEEAGSGGGIEYNCCVCMVRHKGAAFIPCGHTFCRL
CSRELWVSRGNCPLCNGFILEILDIF

Transcript Sequence

Transcript ID

VIT_00s0186g00090.t01
Transcript Infomation

cdna chromosome:12X:Un:8876296:8878488:1 gene:VIT_00s0186g00090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCCCTCTCTCTTTCTCTCTCTCATCATCATCATCATCACCATCATCCCCGTCGGCCGCCA
GACAGATTCAGATACAGATATAGAGAGACAAAGATCCAAAGAACAAGAGGAGGGACAGAT
TCCGTCCACCCCATAATTTTCCATTTCTCCTTTTGATTGATGATTTATTATTAAAAAGCT
GTGCAAATTCCAGATCTGGTCTCCTCCCCGAAGTCCCCACCCACGGAAGACTGTGTGACC
GACTTTGAATGAAAAATGTGGTTAGTATGTCCGTGATGGACCCGTCCACACTCCGAGATC
GGCTTAGAACCAGAGAGGACGACGACGGCAGAGATGCTTGGGCCGGACTGACCCTCGGCG
CCGTGTTGGGCTGCGAGAAGCGGCCTCCGCCGGGCCACATCAACCGAACCCTCCTGGACA
TTATCAGAGACGAGTCCACCGGTTACAAAGACGTTCTTGGCCAGCCCAACAACAACAACA
ACAAGATGAGCTGGAAGTCCTTCAAGGATCGCCTCCGGATCCGCCGCGCTGGAGCCGCCT
GGACCTCCTCCATGCCGATCCCAGCCTCTGACGTCCCCACCAGAAGCCAGCTCTCCCGCC
GCCAGTCCACTCGGGTTACGATGTACACCACCGATCCGCCGGAGCCGACGGAGACCTTCG
AAGAATCTCCTGGGACGCCGGAGAACCCCCTCCCCGTCGAGGCCGTCCAAGTCCATAACT
TAAGGCCTCAGTTTTCACGGAACAATTCCATTCGTGCTCCGTCCCGGACGTTCAGCCGAG
CCGACTCCACTCGCTTGCACACCGGAGTCACGGATGGGCCGGTGGTCTCGCGCCGGCTGT
CGGCGGCATTGGCAGAAGAGCGAGAATTGCAAAGGGCAGAATCTGCGGCAGCTCTGGGAG
GTGATGATGATGAGGCAGGGGAAGAAGAGGATGAAGGGGAGGGGGAGGAGGAGGGGCCAG
AGGCAGCACCGAGGATGTCGCTGATGGCATTATTAGAAGAAACAGACAGGCAGGCGGGAA
TAGTGGGACCCGCATACGTATTAGAAGAAGAAGAAGATGAGGATGAAGAGGAAGAAGCGG
GCAGCGGAGGAGGAATAGAATACAACTGCTGCGTGTGCATGGTGAGGCACAAGGGGGCTG
CCTTCATACCCTGTGGACACACATTTTGCAGGCTGTGTTCCAGGGAGCTGTGGGTGAGCA
GGGGTAACTGCCCTCTCTGCAATGGCTTCATCTTGGAAATCCTCGATATCTTTTAGAAGC
CCAATTTCCCATCTTCTTCATTCTCATGGATATATGTCCTCTCTCCTTCCTCTCTGTTTA
ACTTCACCCTGTGGTCATGAATGCTGAATGAGAAGAAGGTAAAGAAGATGATACAAATTC
CTGTAATGGGGTTGGGAGTTGGGGCCATGGGTGCGGATGGCTTCTCTTGATTTCATTTTG
TATGTTGGATTGTTTATTCCCCAGAATTCCTTTAAAAAACAGGCCAGTGGAATTGTACCA
ACAAAAAAGAAAAGGATTTCCAGGCTGCTGTCAGA