Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0181g00220.t01
CDS Infomation

cds chromosome:12X:Un:7906299:7916137:-1 gene:VIT_00s0181g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAACTAGGTATATGGAGAGATCCAACAGCCTCGCGAGGGAAAAGAGGGCTTTGGAT
CCTTCTTCAACGGAAGAAGGACAGTCTGATAGGAAACGACCTGCTCTGGCTAGTGTAATA
GTTGAAGCTCTGAAGGTGGATAGTCTGCAGAAACTTTGCTCATCATTGGAACCTATTCTT
CGGAGAGTTTTTGATTTGGTTTACCGTCTTACATTTTTCTCACTGACCAAACGGGAGGGT
TGTTTGGAAGCTCACAAAATGCAAACTAGGTATATGGAGAGATCCAACAGCCTCGCGAGG
GAAAAGAGGGCTTTGGATCCTTCTTCAACGGAAGAAGGACAGTCTGATAGGAAACGACCT
GCTCTGGCTAGTGTAATAGTTGAAGCTCTGAAGGTGGATAGTCTGCAGAAACTTTGCTCA
TCATTGGAACCTATTCTTCGGAGAGTTGTCAGTGAAGAGGTGGAGCGTGCTTTGGCAAAG
TTAGGCCCAGCTAAACTTACTGGGAGGTCATCTCCAAAAAGGATAGAAGGGCCTGATGGA
AGAAACTTACAGCTGCAGTTCAGGTCCAGGTTATCTCTCCCTCTCTTTACTGGAGGGAAA
GTAGAAGGGGAGCAGGGTACAACAATCCATATTGTCCTGCTTGATGCAAGCACTGGGCAT
GTTGTAACATCAGGTCCAGAGTCCTCAGTAAAACTAGATGTTGTTGTACTTGAAGGTGAT
TTCAACAATGAAGATGATGATGGCTGGAATCAAGAAGAATTTGAGAGTCACGTGGTGAAA
GAGCGTGAAGGAAAGAGGCCACTTCTGACTGGTGATTTGCAAGTAACCCTGAAGGAAGGT
GTAGGGACGCTAGGAGAGCTGACATTTACTGACAACTCAAGCTGGATAAGGAGCAGGAAG
TTCAGGCTAGGGCTGAAGGTTGCCTCAGGCTATTGTGAGGGCATGCGTATTCGTGAAGCA
AAAACAGATGCCTTCACTGTTAAGGATCACAGAGGGGAATTATACAAGAAGCACTACCCT
CCTGCATTGAATGATGAAGTTTGGCGATTGGAGAAGATTGGCAAAGATGGGTCATTCCAC
AAGAGGTTGAATAAAGCTGGAATATTCACTGTTGAGGACTTCCTACGACTTGTAGTTAGA
GATTCACAAAGATTACGGAATATTCTTGGAAGTGGCATGTCAAATAAGATGTGGGATGTT
CTTGTGGAGCATGCAAAAACTTGTGTTCTAAGTGGGAAACTTTATGTTTACTATCCTGAT
GATGTGAGGAGCGTAGGCGTTGTGTTCAACAATATCTATGAGTTGAGCGGCTTAATAGCA
GGTGGACAATATCACTCAGCTGATTCTCTTACTGACAATCAGAAGGTCTTTGTGGATACC
TTGGTGAAGAAGGCATATGACAATTGGATTAGTGTTGTAGAGTATGATGGCAAGTCTCTT
TTAAACTTTAACCAAAGTAAGAGCTCAGGTTCTTCTCAGACTGAAGTTGCGATGGGCCCA
CAAGACTATCCTAACTCCTTTGACCATCAGCTCACTTTACCAAGCTTGCCGGTTTCAGTT
CCACCACAGCAGCCTTCTGTGGGTCCAAGCATAACGGTTGGAGGGTATAATGATAATATG
CCCACCAGATACCCAATACAGTCGCAGAACGTAAATCTCAATGCTCCTATGCAGTTTGAT
GGCACCTCATTCCCTCTCCAGAATCAGTTGATTGGCAATCCACACCAAGTGCAACTTCCA
AGTAATGAAAGCATGCTTGCCCTTGGTCCCCCGCCAGCAACCACACCAGGCTTCCAATCT
GTTGGGACTTCAAATCTTAATTATAGAGTTGATGACTTCTTCCCAGAGGATGAGATTCGC
ATGAGAAGTCATGAGATGCTTGAAAATGATGATATGCAGCACCTGCTTCGTATCTTCAAC
ATGGGCAATCATGGTCATGCCTCTGCAAATGTTACTGATGATGGGTATCCTTATTCATCA
GCATACATGCCCACTTCATCTACAGGTTATGGCTTTGATGAAGATCGAAGCCGTTCGTCA
GGCAAAGCTGTTGTAGGGTGGCTGAAGCTCAAGGCAGCACTGAGATGGGGCATCTTCGTT
AGGAAGAAGGCTGCTGAAAGACGGGCTCAACTTGTTGAGTTGGATGAACCATAA

Peptide Sequence

PEP ID

VIT_00s0181g00220.t01
PEP Infomation

pep chromosome:12X:Un:7906299:7916137:-1 gene:VIT_00s0181g00220 transcript:VIT_00s0181g00220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQTRYMERSNSLAREKRALDPSSTEEGQSDRKRPALASVIVEALKVDSLQKLCSSLEPIL
RRVFDLVYRLTFFSLTKREGCLEAHKMQTRYMERSNSLAREKRALDPSSTEEGQSDRKRP
ALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGPDG
RNLQLQFRSRLSLPLFTGGKVEGEQGTTIHIVLLDASTGHVVTSGPESSVKLDVVVLEGD
FNNEDDDGWNQEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRK
FRLGLKVASGYCEGMRIREAKTDAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFH
KRLNKAGIFTVEDFLRLVVRDSQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPD
DVRSVGVVFNNIYELSGLIAGGQYHSADSLTDNQKVFVDTLVKKAYDNWISVVEYDGKSL
LNFNQSKSSGSSQTEVAMGPQDYPNSFDHQLTLPSLPVSVPPQQPSVGPSITVGGYNDNM
PTRYPIQSQNVNLNAPMQFDGTSFPLQNQLIGNPHQVQLPSNESMLALGPPPATTPGFQS
VGTSNLNYRVDDFFPEDEIRMRSHEMLENDDMQHLLRIFNMGNHGHASANVTDDGYPYSS
AYMPTSSTGYGFDEDRSRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDEP

Transcript Sequence

Transcript ID

VIT_00s0181g00220.t01
Transcript Infomation

cdna chromosome:12X:Un:7906299:7916137:-1 gene:VIT_00s0181g00220 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAACTAGGTATATGGAGAGATCCAACAGCCTCGCGAGGGAAAAGAGGGCTTTGGAT
CCTTCTTCAACGGAAGAAGGACAGTCTGATAGGAAACGACCTGCTCTGGCTAGTGTAATA
GTTGAAGCTCTGAAGGTGGATAGTCTGCAGAAACTTTGCTCATCATTGGAACCTATTCTT
CGGAGAGTTTTTGATTTGGTTTACCGTCTTACATTTTTCTCACTGACCAAACGGGAGGGT
TGTTTGGAAGCTCACAAAATGCAAACTAGGTATATGGAGAGATCCAACAGCCTCGCGAGG
GAAAAGAGGGCTTTGGATCCTTCTTCAACGGAAGAAGGACAGTCTGATAGGAAACGACCT
GCTCTGGCTAGTGTAATAGTTGAAGCTCTGAAGGTGGATAGTCTGCAGAAACTTTGCTCA
TCATTGGAACCTATTCTTCGGAGAGTTGTCAGTGAAGAGGTGGAGCGTGCTTTGGCAAAG
TTAGGCCCAGCTAAACTTACTGGGAGGTCATCTCCAAAAAGGATAGAAGGGCCTGATGGA
AGAAACTTACAGCTGCAGTTCAGGTCCAGGTTATCTCTCCCTCTCTTTACTGGAGGGAAA
GTAGAAGGGGAGCAGGGTACAACAATCCATATTGTCCTGCTTGATGCAAGCACTGGGCAT
GTTGTAACATCAGGTCCAGAGTCCTCAGTAAAACTAGATGTTGTTGTACTTGAAGGTGAT
TTCAACAATGAAGATGATGATGGCTGGAATCAAGAAGAATTTGAGAGTCACGTGGTGAAA
GAGCGTGAAGGAAAGAGGCCACTTCTGACTGGTGATTTGCAAGTAACCCTGAAGGAAGGT
GTAGGGACGCTAGGAGAGCTGACATTTACTGACAACTCAAGCTGGATAAGGAGCAGGAAG
TTCAGGCTAGGGCTGAAGGTTGCCTCAGGCTATTGTGAGGGCATGCGTATTCGTGAAGCA
AAAACAGATGCCTTCACTGTTAAGGATCACAGAGGGGAATTATACAAGAAGCACTACCCT
CCTGCATTGAATGATGAAGTTTGGCGATTGGAGAAGATTGGCAAAGATGGGTCATTCCAC
AAGAGGTTGAATAAAGCTGGAATATTCACTGTTGAGGACTTCCTACGACTTGTAGTTAGA
GATTCACAAAGATTACGGAATATTCTTGGAAGTGGCATGTCAAATAAGATGTGGGATGTT
CTTGTGGAGCATGCAAAAACTTGTGTTCTAAGTGGGAAACTTTATGTTTACTATCCTGAT
GATGTGAGGAGCGTAGGCGTTGTGTTCAACAATATCTATGAGTTGAGCGGCTTAATAGCA
GGTGGACAATATCACTCAGCTGATTCTCTTACTGACAATCAGAAGGTCTTTGTGGATACC
TTGGTGAAGAAGGCATATGACAATTGGATTAGTGTTGTAGAGTATGATGGCAAGTCTCTT
TTAAACTTTAACCAAAGTAAGAGCTCAGGTTCTTCTCAGACTGAAGTTGCGATGGGCCCA
CAAGACTATCCTAACTCCTTTGACCATCAGCTCACTTTACCAAGCTTGCCGGTTTCAGTT
CCACCACAGCAGCCTTCTGTGGGTCCAAGCATAACGGTTGGAGGGTATAATGATAATATG
CCCACCAGATACCCAATACAGTCGCAGAACGTAAATCTCAATGCTCCTATGCAGTTTGAT
GGCACCTCATTCCCTCTCCAGAATCAGTTGATTGGCAATCCACACCAAGTGCAACTTCCA
AGTAATGAAAGCATGCTTGCCCTTGGTCCCCCGCCAGCAACCACACCAGGCTTCCAATCT
GTTGGGACTTCAAATCTTAATTATAGAGTTGATGACTTCTTCCCAGAGGATGAGATTCGC
ATGAGAAGTCATGAGATGCTTGAAAATGATGATATGCAGCACCTGCTTCGTATCTTCAAC
ATGGGCAATCATGGTCATGCCTCTGCAAATGTTACTGATGATGGGTATCCTTATTCATCA
GCATACATGCCCACTTCATCTACAGGTTATGGCTTTGATGAAGATCGAAGCCGTTCGTCA
GGCAAAGCTGTTGTAGGGTGGCTGAAGCTCAAGGCAGCACTGAGATGGGGCATCTTCGTT
AGGAAGAAGGCTGCTGAAAGACGGGCTCAACTTGTTGAGTTGGATGAACCATAAATTA