Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0179g00290.t01
CDS Infomation

cds chromosome:12X:Un:7527990:7537710:1 gene:VIT_00s0179g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCTTGATTGGGAAATTAGGGTTTGGGGTTTTGTGGGTTTGTTCCAATGCGAGTGTT
GCATCTGTGGAGGGAAGAGAGATGACTAAGAAAAAGAATCCTCTTGTATTCCTAGACGTA
TCAATTGATGGGGATCCTGTGGAAAAAATTGTTATTGAGCTTTTTGCAGATGTTGTTCCT
AAGACAGCAGAGAATTTTAGGGCACTCTGTACAGGTGAAAAGGGTGTTGGTACTTCTACT
GGGAAACCTCTGCACTACAAGGGATCATTTTTCCATCGTATAATTAAAGGATTCATGGCC
CAAGGTGGTGATTTTTCAAAGGGAAATGGCACTGGTGGAGAAAGTATTTATGGAGGGAAG
TTTGCAGATGAGAATTTTAAACGGGCACATGAAGGGCCTGGTTTTCTCTCTATGGCAAAT
AGTGGTCCAAACACAAATGGGTCCCAGTTCTTTATGACTTTCAAGCGTCAACCCCATCTT
GATGGGAAACATGTTGTTTTTGGCAAGGTTGTGCAGGGAATTGACACCTTGAAGAAAATT
GAACAATTGGGAACAGGTGATGGGAAACCTGCTCGGCTTGTAAAAATTGTAGACTGTGGT
GAAACTTCTGAAAATAAAATTCATGGTGCTGTTGGAACAGAGAAAGGGAGAAAGAAAAAA
TCTGGGAAAGCACTTTCTTCTGATGACAGTTCTGATGAGCAAGCAAGAGGAAGACGCAGG
AACTCTCTCAAAGACAGAAGAAAGAAAAGAAAACGGAAATACTCATCATCTGATTCATAC
AGCTCCGATACTGATTCTGATTCTTATTCTTCTGATAATGATTCAGCTTCAGATTCAGAT
TCCTCACTATCAGATTCAAGTTCCTCCAGCGATGGAAGGCGTAGAAAGAGGAGGAGACCA
TTGAAAAGAGATAAGCACCAGCGCGGGAAAAAAAGGAAGGATGGACGAAAGGATAGGAAG
AGAGGTCTACGTGACAAAAAATCACGGCACAAGTCCAAATGGAGTTCAGAGAGTTCGAGT
GGAACAGATAGTGGGAGTACTAGCAGCAGCAGAAGCAGCTCTGATGATGAGAAAGCCAGT
CATCATGTTTCTGCTCATAAAACCAGTAACTCAACACACACTGAAAGCAAACACCCACGA
AATTTAGGAAAGAAAACTGGGGCCCTAGAACAAGATACTATTACAAAACCACAAAAGGAT
CATGAGCTGAAGATGTCTGAGGATGATTCATCGCACGAAGAGGGGGAATTTTCTCAAAAG
AATGAACTTCTAAATAATGGACATGGTACAGAAGCTAAATCTGAGAAAACTGCCAAGCAA
CATCCATTGTCAGATGACTCGGGCAAATCCAGGAGTCTCACTCCAAGCCCAAGAAGAAGG
GCAAAGATTAGCCCAAGGAGAAATCCAAGCATTAGTCCTAAAAAAATCTCAACTATGAGT
CCCAGATACCAGCATGACAGTCGCAGTCCTGCTAGGAAGTCTGGCAAGCGAAACCAGGGA
AATTCAAGGAGCCCATTAGGTAGTCCTGCCCGCAAAGCCACTGAACCTCCTGCTTCGAAT
CATGGACGTGGTTTGTCAAGAAGCCCTTCTCCCAATGGTGCTCCAAAACGCATTAGAAAA
GGGCGTGGTTTTACTGATCGTTTCTCCTTTGCACGTCGATACCGTACTCCATCTCCAGAG
CGTTCCCCGCGCCGGTCCTACCCTTATGGTGGAAGAAATGTTAATGCAAGGAATCGCGAT
AGGTATTCAAGCTACAGAAGTTACTCAGAGCGCTCCCCACAAAGACGTTACAGAAGCCCA
CCACGAGGAAGGAGTCCCCCCAGATACCGACGCAGAAGAAGCAGAAGCCGGAGTGCGTCT
CGCAGCCCAGGTGCTTACCATGGTCGTAACAGGGTCCGCAGCCGGAGTCCAATGCGTAGT
CCAAGTCCTACAGATAACCGACCTCCCATAAGTGAGAGGTTAAGGTCCCGTCTTGGACCC
CAAGGTGATGATCAGCGCCCTTCAGATAAAGGAAGGTTCAGATCAAGGTCCAGGAGCAGA
GGCTCATCTGGATCTGGATCGACAGAGGCCACCCCACAAAAACCCTGCGGTAAAGCAGCT
TCCGTGTCTCCCAGCAGGTCTAGATCAAGCTCCCCAGATGGACAAAAGGGTTTAGTCTCC
TATGGAGATGCCAGTCCCGTATGA

Peptide Sequence

PEP ID

VIT_00s0179g00290.t01
PEP Infomation

pep chromosome:12X:Un:7527990:7537710:1 gene:VIT_00s0179g00290 transcript:VIT_00s0179g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSLIGKLGFGVLWVCSNASVASVEGREMTKKKNPLVFLDVSIDGDPVEKIVIELFADVVP
KTAENFRALCTGEKGVGTSTGKPLHYKGSFFHRIIKGFMAQGGDFSKGNGTGGESIYGGK
FADENFKRAHEGPGFLSMANSGPNTNGSQFFMTFKRQPHLDGKHVVFGKVVQGIDTLKKI
EQLGTGDGKPARLVKIVDCGETSENKIHGAVGTEKGRKKKSGKALSSDDSSDEQARGRRR
NSLKDRRKKRKRKYSSSDSYSSDTDSDSYSSDNDSASDSDSSLSDSSSSSDGRRRKRRRP
LKRDKHQRGKKRKDGRKDRKRGLRDKKSRHKSKWSSESSSGTDSGSTSSSRSSSDDEKAS
HHVSAHKTSNSTHTESKHPRNLGKKTGALEQDTITKPQKDHELKMSEDDSSHEEGEFSQK
NELLNNGHGTEAKSEKTAKQHPLSDDSGKSRSLTPSPRRRAKISPRRNPSISPKKISTMS
PRYQHDSRSPARKSGKRNQGNSRSPLGSPARKATEPPASNHGRGLSRSPSPNGAPKRIRK
GRGFTDRFSFARRYRTPSPERSPRRSYPYGGRNVNARNRDRYSSYRSYSERSPQRRYRSP
PRGRSPPRYRRRRSRSRSASRSPGAYHGRNRVRSRSPMRSPSPTDNRPPISERLRSRLGP
QGDDQRPSDKGRFRSRSRSRGSSGSGSTEATPQKPCGKAASVSPSRSRSSSPDGQKGLVS
YGDASPV

Transcript Sequence

Transcript ID

VIT_00s0179g00290.t01
Transcript Infomation

cdna chromosome:12X:Un:7527990:7537710:1 gene:VIT_00s0179g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCTTGATTGGGAAATTAGGGTTTGGGGTTTTGTGGGTTTGTTCCAATGCGAGTGTT
GCATCTGTGGAGGGAAGAGAGATGACTAAGAAAAAGAATCCTCTTGTATTCCTAGACGTA
TCAATTGATGGGGATCCTGTGGAAAAAATTGTTATTGAGCTTTTTGCAGATGTTGTTCCT
AAGACAGCAGAGAATTTTAGGGCACTCTGTACAGGTGAAAAGGGTGTTGGTACTTCTACT
GGGAAACCTCTGCACTACAAGGGATCATTTTTCCATCGTATAATTAAAGGATTCATGGCC
CAAGGTGGTGATTTTTCAAAGGGAAATGGCACTGGTGGAGAAAGTATTTATGGAGGGAAG
TTTGCAGATGAGAATTTTAAACGGGCACATGAAGGGCCTGGTTTTCTCTCTATGGCAAAT
AGTGGTCCAAACACAAATGGGTCCCAGTTCTTTATGACTTTCAAGCGTCAACCCCATCTT
GATGGGAAACATGTTGTTTTTGGCAAGGTTGTGCAGGGAATTGACACCTTGAAGAAAATT
GAACAATTGGGAACAGGTGATGGGAAACCTGCTCGGCTTGTAAAAATTGTAGACTGTGGT
GAAACTTCTGAAAATAAAATTCATGGTGCTGTTGGAACAGAGAAAGGGAGAAAGAAAAAA
TCTGGGAAAGCACTTTCTTCTGATGACAGTTCTGATGAGCAAGCAAGAGGAAGACGCAGG
AACTCTCTCAAAGACAGAAGAAAGAAAAGAAAACGGAAATACTCATCATCTGATTCATAC
AGCTCCGATACTGATTCTGATTCTTATTCTTCTGATAATGATTCAGCTTCAGATTCAGAT
TCCTCACTATCAGATTCAAGTTCCTCCAGCGATGGAAGGCGTAGAAAGAGGAGGAGACCA
TTGAAAAGAGATAAGCACCAGCGCGGGAAAAAAAGGAAGGATGGACGAAAGGATAGGAAG
AGAGGTCTACGTGACAAAAAATCACGGCACAAGTCCAAATGGAGTTCAGAGAGTTCGAGT
GGAACAGATAGTGGGAGTACTAGCAGCAGCAGAAGCAGCTCTGATGATGAGAAAGCCAGT
CATCATGTTTCTGCTCATAAAACCAGTAACTCAACACACACTGAAAGCAAACACCCACGA
AATTTAGGAAAGAAAACTGGGGCCCTAGAACAAGATACTATTACAAAACCACAAAAGGAT
CATGAGCTGAAGATGTCTGAGGATGATTCATCGCACGAAGAGGGGGAATTTTCTCAAAAG
AATGAACTTCTAAATAATGGACATGGTACAGAAGCTAAATCTGAGAAAACTGCCAAGCAA
CATCCATTGTCAGATGACTCGGGCAAATCCAGGAGTCTCACTCCAAGCCCAAGAAGAAGG
GCAAAGATTAGCCCAAGGAGAAATCCAAGCATTAGTCCTAAAAAAATCTCAACTATGAGT
CCCAGATACCAGCATGACAGTCGCAGTCCTGCTAGGAAGTCTGGCAAGCGAAACCAGGGA
AATTCAAGGAGCCCATTAGGTAGTCCTGCCCGCAAAGCCACTGAACCTCCTGCTTCGAAT
CATGGACGTGGTTTGTCAAGAAGCCCTTCTCCCAATGGTGCTCCAAAACGCATTAGAAAA
GGGCGTGGTTTTACTGATCGTTTCTCCTTTGCACGTCGATACCGTACTCCATCTCCAGAG
CGTTCCCCGCGCCGGTCCTACCCTTATGGTGGAAGAAATGTTAATGCAAGGAATCGCGAT
AGGTATTCAAGCTACAGAAGTTACTCAGAGCGCTCCCCACAAAGACGTTACAGAAGCCCA
CCACGAGGAAGGAGTCCCCCCAGATACCGACGCAGAAGAAGCAGAAGCCGGAGTGCGTCT
CGCAGCCCAGGTGCTTACCATGGTCGTAACAGGGTCCGCAGCCGGAGTCCAATGCGTAGT
CCAAGTCCTACAGATAACCGACCTCCCATAAGTGAGAGGTTAAGGTCCCGTCTTGGACCC
CAAGGTGATGATCAGCGCCCTTCAGATAAAGGAAGGTTCAGATCAAGGTCCAGGAGCAGA
GGCTCATCTGGATCTGGATCGACAGAGGCCACCCCACAAAAACCCTGCGGTAAAGCAGCT
TCCGTGTCTCCCAGCAGGTCTAGATCAAGCTCCCCAGATGGACAAAAGGGTTTAGTCTCC
TATGGAGATGCCAGTCCCGTATGAGACAAACAGTTTTTATTGGCGATGGCTTGTAGATTG
GCAAGGACTAGCTTTCTGGGTAGACCTTTTATCACCATTTGGTGTACAAAAAGGCTTGAC
AGGCATGATGAGAAGCGTATCAACCAGGTTCAATCTTGCTATGATGGAATGTAATCTAAA
CAGCTTGGGGCTTGCCCATCTCTTGGAATTTTCTTGATTTTGGTATTTACTAATATTTGA
TCCAAATCTGAAATAAGGCACCTTGACATGGTTTGGATAATTATCTGGGTGTTACAGCAA
CATCTGATGCGTTTGGCCTCCGGAGCTGAAACAGTTTTTCCTGGACTTGCATGAAGAACA
GTTTATTTCTGTATTGCCCTGTACTCTTGCTTTCTTTTATCCATGAAATATTTAGACTAG
TTAAAAGACTTTTTTTGCTGCTCCTTCCTTCCATTGTGTCTTGGTTTTCATATCAATTGA
ATGAGGGTTTCAT