Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0179g00170.t01
CDS Infomation

cds chromosome:12X:Un:7430957:7434405:1 gene:VIT_00s0179g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCAATTCAACTTCTTTATCTGAGGAAGCTAGTGTTTCTTCTGGCACCAGAGTTCAG
GACTTCAGCAGCTTGAATCCAGTGGTTTCAGGCATTTCTTCTCAGCAGCAAAATCAACAG
AAGATCAAGAAGAAGAGAAACCTCCCTGGAAACCCAGACCCAGATGCTGAAGTGATTGCT
TTATCTCCAAAGACCCTACTTGCTACCAATAGATTTGTCTGTGAGATCTGCAACAAAGGG
TTTCAGAGAGATCAGAACCTTCAGCTCCACAGGAGAGGCCACAACCTTCCATGGAAGCTG
AAGCAAAGAAACAGCAAAGAGATAAAAAAGAAAGCCTATGTTTGCCCTGAGCCCACATGT
GTCCACCACCATCCCTCGAGGGCCCTTGGCGATCTTACAGGAATCAAGAAACACTTCTGT
AGGAAACATGGGGAGAAGAAATGGAAGTGTGAGAAGTGTTCAAAGATCTATGCAGTTCAA
TCAGATTGGAAGGCTCACTCTAAAACCTGTGGAACTAGAGAATACAGATGTGACTGCGGA
ACCCTTTTCTCCAGGAAGGATAGCTTCATCACCCACAGAGCATTTTGTGATGCTTTAGCT
GAAGAAAGTGCAAGGCTTTCAGTGATGAACTCAACCAACCAACTTCTCAATCTTCACCCA
CAAAACCCATGTTCTTTCTTTCCTGCTTTCTCAACCCACCACCAGCAGCAGCAGCACTTC
CCAAACCCACCAACCCACATTTCTCTAACTTCATGGGATTCACCTCAAAACCCTAACCCT
AACAACCCTAACCAAAGCCCACTTCAGATCAAGCCTGAAATTCACCACCTCCAAATCCCA
TCTCCCATCTCTCCACAATTTTTCCAAGAACAACCACCACCACCCCCACCGACACAGCAG
AAGAACTTGATGACTTCACCCTTCCAAAACTTCCACGTAAGCACACAGCCCACCTCGGCA
CACCTGTCAGCCACTGCACTCCTCCAGAAGGCTGCAACTGTTGGTGCAACTGCCAACATC
TCATTCACAGGCTCTTCACAATCTCACATGTCTCGCCTACACATGGCGGAGCTTGGCTCA
TTCCCCCACGTGGGCGCCGGAATCTCGCCGGAGTACCTGGGTTTCGCCTCTGGAAACCTT
TCCACGTGGCAAAAAAGCGACCGGCTGACCAGGGACTTCCTGGGTCTGACCGGTGAGTCT
GGTGGCTCGGTTAACGTTAGCGTGAATATGAGGGACATGCTACAGTACACGGGAGGCGTA
GAGTTCCAACCCTACGACCGTGACCACTCCTTGCTGAAGGCCCATGGCTTCGAAACCTGG
GGTGACTGTTAG

Peptide Sequence

PEP ID

VIT_00s0179g00170.t01
PEP Infomation

pep chromosome:12X:Un:7430957:7434405:1 gene:VIT_00s0179g00170 transcript:VIT_00s0179g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSNSTSLSEEASVSSGTRVQDFSSLNPVVSGISSQQQNQQKIKKKRNLPGNPDPDAEVIA
LSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSKEIKKKAYVCPEPTC
VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCGTREYRCDCG
TLFSRKDSFITHRAFCDALAEESARLSVMNSTNQLLNLHPQNPCSFFPAFSTHHQQQQHF
PNPPTHISLTSWDSPQNPNPNNPNQSPLQIKPEIHHLQIPSPISPQFFQEQPPPPPPTQQ
KNLMTSPFQNFHVSTQPTSAHLSATALLQKAATVGATANISFTGSSQSHMSRLHMAELGS
FPHVGAGISPEYLGFASGNLSTWQKSDRLTRDFLGLTGESGGSVNVSVNMRDMLQYTGGV
EFQPYDRDHSLLKAHGFETWGDC

Transcript Sequence

Transcript ID

VIT_00s0179g00170.t01
Transcript Infomation

cdna chromosome:12X:Un:7430957:7434405:1 gene:VIT_00s0179g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGGAGATTTGAAAGAGATATCTGAATTGTTTTGCAGAGCTGCTCAGACAAGCAATCCAT
GGTTAGATAGCGACTTGGAGAATAACCCATCATCATCATCTCTTCACGAGATTTTGCTTT
TGCCACCCTCCTTTGAATGATGCCTTTCTGTGGCTAAATGTCACTGCCACCTGTTCACCA
TCAAGCCTGTGTTTAGTTTGCATATCAAAGCTAGAGGTGGGGATTCTCTTTGTTTCTGCC
TTCCTCCCTCTCGTCCTTCCTCTTCTTGGTTTTTTCTTCAAAGGTGCAAAAGTAGGGGTT
GCTTACGAGGGTGGAAGTGGTGGATATCAAACAAAACAAAGAGAGATTACATATCTCTCT
GCCTTTTGGTTTTCTTTCTTGGACTTTTCTTCACAGGCATGTTTCCTGCAGCCATGTCCA
ATTCAACTTCTTTATCTGAGGAAGCTAGTGTTTCTTCTGGCACCAGAGTTCAGGACTTCA
GCAGCTTGAATCCAGTGGTTTCAGGCATTTCTTCTCAGCAGCAAAATCAACAGAAGATCA
AGAAGAAGAGAAACCTCCCTGGAAACCCAGACCCAGATGCTGAAGTGATTGCTTTATCTC
CAAAGACCCTACTTGCTACCAATAGATTTGTCTGTGAGATCTGCAACAAAGGGTTTCAGA
GAGATCAGAACCTTCAGCTCCACAGGAGAGGCCACAACCTTCCATGGAAGCTGAAGCAAA
GAAACAGCAAAGAGATAAAAAAGAAAGCCTATGTTTGCCCTGAGCCCACATGTGTCCACC
ACCATCCCTCGAGGGCCCTTGGCGATCTTACAGGAATCAAGAAACACTTCTGTAGGAAAC
ATGGGGAGAAGAAATGGAAGTGTGAGAAGTGTTCAAAGATCTATGCAGTTCAATCAGATT
GGAAGGCTCACTCTAAAACCTGTGGAACTAGAGAATACAGATGTGACTGCGGAACCCTTT
TCTCCAGGAAGGATAGCTTCATCACCCACAGAGCATTTTGTGATGCTTTAGCTGAAGAAA
GTGCAAGGCTTTCAGTGATGAACTCAACCAACCAACTTCTCAATCTTCACCCACAAAACC
CATGTTCTTTCTTTCCTGCTTTCTCAACCCACCACCAGCAGCAGCAGCACTTCCCAAACC
CACCAACCCACATTTCTCTAACTTCATGGGATTCACCTCAAAACCCTAACCCTAACAACC
CTAACCAAAGCCCACTTCAGATCAAGCCTGAAATTCACCACCTCCAAATCCCATCTCCCA
TCTCTCCACAATTTTTCCAAGAACAACCACCACCACCCCCACCGACACAGCAGAAGAACT
TGATGACTTCACCCTTCCAAAACTTCCACGTAAGCACACAGCCCACCTCGGCACACCTGT
CAGCCACTGCACTCCTCCAGAAGGCTGCAACTGTTGGTGCAACTGCCAACATCTCATTCA
CAGGCTCTTCACAATCTCACATGTCTCGCCTACACATGGCGGAGCTTGGCTCATTCCCCC
ACGTGGGCGCCGGAATCTCGCCGGAGTACCTGGGTTTCGCCTCTGGAAACCTTTCCACGT
GGCAAAAAAGCGACCGGCTGACCAGGGACTTCCTGGGTCTGACCGGTGAGTCTGGTGGCT
CGGTTAACGTTAGCGTGAATATGAGGGACATGCTACAGTACACGGGAGGCGTAGAGTTCC
AACCCTACGACCGTGACCACTCCTTGCTGAAGGCCCATGGCTTCGAAACCTGGGGTGACT
GTTAGAAAGAACCCAACGGTAAAACAGTAACTTAACTCCCTTGCTCGAATTGACGAAAAC
ACCCCCCTCCGCCTCCCATCATTTCATATTTCCCCTTTTCTTTTTCTTTTTCTTTGTTTT
TTTTCCCTTTAGTAGTTTAATTTCCTCATAAGGGTTTGATGCATTTTATTTTCTTTTTTT
CGTCAGAGGTAATCATGTAGCCTAGAAGACATAAAAAGTATAATGAGGCATCCGA