Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0179g00150.t01
CDS Infomation

cds chromosome:12X:Un:7416097:7419674:1 gene:VIT_00s0179g00150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATCCGATGTACCCTGTGAAGGAGGAGTTTCCAGGATCGAGTTCCTCCCCCCAGTCC
GGTGAGCCACCGGTAGTGCCACAGCCGGTTGAGGGGCTTCATGATGCGGGTCCTCCGCCA
TTTCTTACAAAGACATTTGACATTGTGGATGACCCAGCAAGCGATCATGTGGTCTCTTGG
AGCAGAGCAGGTAGCAGCTTTGTTGTATGGGACCCCCATGCCTTCTCCACCAATCTCCTC
CCCAAAAACTTCAAGCACAATAATTTCTCAAGCTTTGTCAGGCAGCTCAACACTTATGGT
TTTAGAAAGATTGATCCGGACAGATGGGAGTTTGCAAATGAAGGATTCATCAGGGGTCAA
AGACATCTCCTTAAGAACATCAGGAGAAGAAAGACACCTTCTCAGGCTCCTCCCCCACAT
CAAGCTTTGGATCCTTGTGTTGAAGTAGGAAGGTTTGGACTGGATGGAGAAGTCGATCGA
TTGCAGCGTGACAAGCATGTTCTGATGATGGAATTGGTTAAGCTCAGGCAGCAGCAGCAG
AATACTAGAATCACACTCCAAGCAATGGAGCAAAGGCTACAAGGGACAGAGATAAAGCAG
CAACAGATGATGAATTTCTTGGCAAGAGCAATGCAGAACCCTGCCTTTATTCAGCAGTTA
GTCCAGCAGAAGGAGAGGAGAAAGGAGATTGTAGAAGCCATTAGTAAGAAGAGAAGAAGG
CCTATTGATCAAGGGACTAGTGGAGCTGGAGGCACTGAATCCAGCCATGGCAATGGATTG
AGGAACCCCATTAAGATTGAGCCTCTACATTTCACAGAAGGAAATGGCTTTGAAGTTTCA
GAGCTAGAGGCACTTGCTTTTGAAATGCAAGGGTTGGGTAGACCAAGAAAGGAGCTAGAG
GATCATGAAGAGCTAGACCCTCCTGAAAGTGAAGATAAAGAACTTGATGAGGGGTTCTGG
GAAGAACTATTGAATGAGAGATTTGGCTGTCCATCAAGCCTACCTGGTGCTGAAGGAGAG
GAAGAAGAAGAAGATGTGAATGTCCTGGCTGGCAGATTTGGTTACCTGGGCTCCAGCCCA
CAGTAG

Peptide Sequence

PEP ID

VIT_00s0179g00150.t01
PEP Infomation

pep chromosome:12X:Un:7416097:7419674:1 gene:VIT_00s0179g00150 transcript:VIT_00s0179g00150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNPMYPVKEEFPGSSSSPQSGEPPVVPQPVEGLHDAGPPPFLTKTFDIVDDPASDHVVSW
SRAGSSFVVWDPHAFSTNLLPKNFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFIRGQ
RHLLKNIRRRKTPSQAPPPHQALDPCVEVGRFGLDGEVDRLQRDKHVLMMELVKLRQQQQ
NTRITLQAMEQRLQGTEIKQQQMMNFLARAMQNPAFIQQLVQQKERRKEIVEAISKKRRR
PIDQGTSGAGGTESSHGNGLRNPIKIEPLHFTEGNGFEVSELEALAFEMQGLGRPRKELE
DHEELDPPESEDKELDEGFWEELLNERFGCPSSLPGAEGEEEEEDVNVLAGRFGYLGSSP
Q

Transcript Sequence

Transcript ID

VIT_00s0179g00150.t01
Transcript Infomation

cdna chromosome:12X:Un:7416097:7419674:1 gene:VIT_00s0179g00150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTTTCTCTCTTCATCTGATTCTCAATCTCACTTTCACTTTGTCCAAATTTTTTGAAATT
TTTTTGAAATAGTTCATTGGGGGCACTGTGTCTCCTTCTTATCATCTAGAATTCTGTTTT
ATTTCACTGTATAATACTGTTTTTTTTTTTTTTTTGGGTGTATGGACTCTGTTTTTCCGG
CTAATCCCACGTTCGGATTAGGCTCTGTATCGGCTACTCACGTATAATTTCGAGGAAAGA
ATCGAGACCCATTGATTTTTAATCATGAATCCGATGTACCCTGTGAAGGAGGAGTTTCCA
GGATCGAGTTCCTCCCCCCAGTCCGGTGAGCCACCGGTAGTGCCACAGCCGGTTGAGGGG
CTTCATGATGCGGGTCCTCCGCCATTTCTTACAAAGACATTTGACATTGTGGATGACCCA
GCAAGCGATCATGTGGTCTCTTGGAGCAGAGCAGGTAGCAGCTTTGTTGTATGGGACCCC
CATGCCTTCTCCACCAATCTCCTCCCCAAAAACTTCAAGCACAATAATTTCTCAAGCTTT
GTCAGGCAGCTCAACACTTATGGTTTTAGAAAGATTGATCCGGACAGATGGGAGTTTGCA
AATGAAGGATTCATCAGGGGTCAAAGACATCTCCTTAAGAACATCAGGAGAAGAAAGACA
CCTTCTCAGGCTCCTCCCCCACATCAAGCTTTGGATCCTTGTGTTGAAGTAGGAAGGTTT
GGACTGGATGGAGAAGTCGATCGATTGCAGCGTGACAAGCATGTTCTGATGATGGAATTG
GTTAAGCTCAGGCAGCAGCAGCAGAATACTAGAATCACACTCCAAGCAATGGAGCAAAGG
CTACAAGGGACAGAGATAAAGCAGCAACAGATGATGAATTTCTTGGCAAGAGCAATGCAG
AACCCTGCCTTTATTCAGCAGTTAGTCCAGCAGAAGGAGAGGAGAAAGGAGATTGTAGAA
GCCATTAGTAAGAAGAGAAGAAGGCCTATTGATCAAGGGACTAGTGGAGCTGGAGGCACT
GAATCCAGCCATGGCAATGGATTGAGGAACCCCATTAAGATTGAGCCTCTACATTTCACA
GAAGGAAATGGCTTTGAAGTTTCAGAGCTAGAGGCACTTGCTTTTGAAATGCAAGGGTTG
GGTAGACCAAGAAAGGAGCTAGAGGATCATGAAGAGCTAGACCCTCCTGAAAGTGAAGAT
AAAGAACTTGATGAGGGGTTCTGGGAAGAACTATTGAATGAGAGATTTGGCTGTCCATCA
AGCCTACCTGGTGCTGAAGGAGAGGAAGAAGAAGAAGATGTGAATGTCCTGGCTGGCAGA
TTTGGTTACCTGGGCTCCAGCCCACAGTAGGAGCCCATTCTGCATCAATAGTCTTCCACC
CCCAGTTTTCTGCATCAGTTGCCTTTTTACTTCACTTCAATGGCTGTTTCTTTTGGATAC
GAGGATTACCAAGCAGTGTATCCTCACCAAATATTAGTCCTACTGTTCTAACTCTTGTAT
TTTTTCTTCTAAATTTTCTTTCACTCTCCCTTTTTTTCTTTCTTGTACACTCCTCTTTTC
AATTCCTCTAAGTTGCAGGAATTGCTTGAACAGAGTTTGTGGAAGTTCCCATCATAATTT
GTCTGAGAACCTGCTGAACTTGAGAAAGAGTGGCTGCAAGTTTCAAGAGCCTAGAAACCA
CAATAAATTGAAGCTTCTGGAACCCAGTAGCAAATGGTTTCAACAAGACAAAGAATGAAA
GATGGTCGGTGATGAATTTGATGATGTGAAGGTGGGTGGCAATCAAGATTTTTCCTTGTC
ACATCTTTGTCCACATCAATCATTTTGAATATAGATGGCCTGCAGAGAGATATAGGGGAA
AAGAGGCATATGAAAAGGTGGTAAGAGTCACTGTGTTGAGGTGGAACTATGCTCTGTGTC
CCTGCACTTGGGTCTATTCTGAAAGTTTCATTTGTGTGTGCAATCTTGGGATATTGATGA
AGATGGTTCTGCAAAAGGTTGCCATTGGTCTAACATACATGTTCTGTAATTGCTGTACTT
TTTTCCTAAATGAAATTTGTTCAGAACCTATTACTTGTGATTGACCTGTTAGGT