Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0174g00290.t01
CDS Infomation

cds chromosome:12X:Un:7159525:7161971:1 gene:VIT_00s0174g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTCAGTTGCTTCTGTCTGAACCAAGCTGGAGCGATGGTGGAGATGAAGACTCTGTC
AAGCTTAGAATTTCTCTCTTAAATAAGTTGGAATCAATTATCTGTTCATTGATTTCATCA
AGAGCTCGGTCTGAGGCTCGAGTATGGCTTTGCAATGCTATGGCGGGCATAAGATCTATC
ATGCCCCGCCATCAGCGTGACTTATTTGTTGACCTATTTAGGTCTAAGCCATGGAAGCGT
GGCCTAGCTGCTCAACTGTGGCGGATGATTTTTGAGAAGATGCCACACAAAGCAGGGAAA
ATTATAGCCAAGAAAAGTTATATGCTTGAGAATTTCTTTAAAGGAAATCCAACGCGTATA
ATGCATTGGTTTTCTAATTTTTCGACTGGTGGTGGATTGGAGACTAGAAAAGGTGCTAAG
GCATTATCCCAATTTGCCTTTGTGAATCGGGACATTTGTTGGGAGGAACTTGAATGGCAA
GGAAAACATGGGCAATCACCTGCAATGGTTGCAACAAAACCGCATTACTTTCTTGATTTG
GATGTCCAGAGGACAGTGGAAAATTTCCTTGAATATGTGCCTGAATTTTGGTCCTCCGAT
GAGTTTGCTGAGTCACTTAAAGATGGCGAGATTTGTTCTATTGATAGAAAGTTCTTTGTA
GATGTTTTTGTTGATCTGATGTATAAAGAGGATTCAAGAAGTGTGTGGGAAGCAATAGAC
GAGTTCCTAATGGAGGAATCTTTCTCTTCTCTCTGTCAACACCTTCTTATTGTTATTGAA
GAGCCAGACTTCTGCCTTTTCCTGGAATTGATTCATAAATATATCAACCCAAAAATGGAA
CATAAGGATTTTGGACGTTCATCCTGTTGGCTTGAGATTATACTTTCTAAGTGCAGTCAT
TTTGAGTCTATTGATCACATACTTCTGTTAAATGCTGTTATTAATCAAGGACGCCAGCTC
CTACGGCTTGTACATGATGAAGATACACAAGAGGAACAAGCAAAAATAAAGGATGTTGTG
TTGCAAATTTGCACAATCTCAAGCAATGCCAATGGCTTGGCCCCAATCTTGAAATGCTTC
AAGACAAAGACCACAGAAGTCATAAAATGGTTGGGTCTTCAGTCTTGGGTTCTCCATTAT
AGATTGTCAGAGGAATGCTTGACACCTGAGTCCTGGGAATCTTTATTCCTAAATAATGGT
ATAAGTTTTCACAAATCGGATAAATATGCATTGCTACATGATGATGGATTTGCAGAAGAA
AATGGGTCAGATTTGGATGATAGGACCTCAATCAGAGCTAGACGCAAGAAGAAAGAAAAA
AGTAGAAAGAAAAGGAAGAAGAACTTTGACCATGATGACATCTACGAGAATGAGCTGTTG
GATTTTGGTACATCCAGTGATAGGCTGGGTTTGGGATCTCATACTGGAAGTTGGTTACTC
AGTACTGATGGGTACTCCACTTCATGGAGCAGTGTGGATTTACCAGAACACCTATCTAAG
CATTGCTTTTCTACATGGATGAGTTGGATATTTACCAAGGCTAGCTCTGTGGCTTAG

Peptide Sequence

PEP ID

VIT_00s0174g00290.t01
PEP Infomation

pep chromosome:12X:Un:7159525:7161971:1 gene:VIT_00s0174g00290 transcript:VIT_00s0174g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVQLLLSEPSWSDGGDEDSVKLRISLLNKLESIICSLISSRARSEARVWLCNAMAGIRSI
MPRHQRDLFVDLFRSKPWKRGLAAQLWRMIFEKMPHKAGKIIAKKSYMLENFFKGNPTRI
MHWFSNFSTGGGLETRKGAKALSQFAFVNRDICWEELEWQGKHGQSPAMVATKPHYFLDL
DVQRTVENFLEYVPEFWSSDEFAESLKDGEICSIDRKFFVDVFVDLMYKEDSRSVWEAID
EFLMEESFSSLCQHLLIVIEEPDFCLFLELIHKYINPKMEHKDFGRSSCWLEIILSKCSH
FESIDHILLLNAVINQGRQLLRLVHDEDTQEEQAKIKDVVLQICTISSNANGLAPILKCF
KTKTTEVIKWLGLQSWVLHYRLSEECLTPESWESLFLNNGISFHKSDKYALLHDDGFAEE
NGSDLDDRTSIRARRKKKEKSRKKRKKNFDHDDIYENELLDFGTSSDRLGLGSHTGSWLL
STDGYSTSWSSVDLPEHLSKHCFSTWMSWIFTKASSVA

Transcript Sequence

Transcript ID

VIT_00s0174g00290.t01
Transcript Infomation

cdna chromosome:12X:Un:7159525:7161971:1 gene:VIT_00s0174g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AATGGTTCAGTTGCTTCTGTCTGAACCAAGCTGGAGCGATGGTGGAGATGAAGACTCTGT
CAAGCTTAGAATTTCTCTCTTAAATAAGTTGGAATCAATTATCTGTTCATTGATTTCATC
AAGAGCTCGGTCTGAGGCTCGAGTATGGCTTTGCAATGCTATGGCGGGCATAAGATCTAT
CATGCCCCGCCATCAGCGTGACTTATTTGTTGACCTATTTAGGTCTAAGCCATGGAAGCG
TGGCCTAGCTGCTCAACTGTGGCGGATGATTTTTGAGAAGATGCCACACAAAGCAGGGAA
AATTATAGCCAAGAAAAGTTATATGCTTGAGAATTTCTTTAAAGGAAATCCAACGCGTAT
AATGCATTGGTTTTCTAATTTTTCGACTGGTGGTGGATTGGAGACTAGAAAAGGTGCTAA
GGCATTATCCCAATTTGCCTTTGTGAATCGGGACATTTGTTGGGAGGAACTTGAATGGCA
AGGAAAACATGGGCAATCACCTGCAATGGTTGCAACAAAACCGCATTACTTTCTTGATTT
GGATGTCCAGAGGACAGTGGAAAATTTCCTTGAATATGTGCCTGAATTTTGGTCCTCCGA
TGAGTTTGCTGAGTCACTTAAAGATGGCGAGATTTGTTCTATTGATAGAAAGTTCTTTGT
AGATGTTTTTGTTGATCTGATGTATAAAGAGGATTCAAGAAGTGTGTGGGAAGCAATAGA
CGAGTTCCTAATGGAGGAATCTTTCTCTTCTCTCTGTCAACACCTTCTTATTGTTATTGA
AGAGCCAGACTTCTGCCTTTTCCTGGAATTGATTCATAAATATATCAACCCAAAAATGGA
ACATAAGGATTTTGGACGTTCATCCTGTTGGCTTGAGATTATACTTTCTAAGTGCAGTCA
TTTTGAGTCTATTGATCACATACTTCTGTTAAATGCTGTTATTAATCAAGGACGCCAGCT
CCTACGGCTTGTACATGATGAAGATACACAAGAGGAACAAGCAAAAATAAAGGATGTTGT
GTTGCAAATTTGCACAATCTCAAGCAATGCCAATGGCTTGGCCCCAATCTTGAAATGCTT
CAAGACAAAGACCACAGAAGTCATAAAATGGTTGGGTCTTCAGTCTTGGGTTCTCCATTA
TAGATTGTCAGAGGAATGCTTGACACCTGAGTCCTGGGAATCTTTATTCCTAAATAATGG
TATAAGTTTTCACAAATCGGATAAATATGCATTGCTACATGATGATGGATTTGCAGAAGA
AAATGGGTCAGATTTGGATGATAGGACCTCAATCAGAGCTAGACGCAAGAAGAAAGAAAA
AAGTAGAAAGAAAAGGAAGAAGAACTTTGACCATGATGACATCTACGAGAATGAGCTGTT
GGATTTTGGTACATCCAGTGATAGGCTGGGTTTGGGATCTCATACTGGAAGTTGGTTACT
CAGTACTGATGGGTACTCCACTTCATGGAGCAGTGTGGATTTACCAGAACACCTATCTAA
GCATTGCTTTTCTACATGGATGAGTTGGATATTTACCAAGGCTAGCTCTGTGGCTTAG