Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0174g00270.t01
CDS Infomation

cds chromosome:12X:Un:7152028:7153661:1 gene:VIT_00s0174g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCAAACCAGATATGATGAACAATAACTGCCTTGGATGGGCAGCAAGAGACGAATCT
GGAGTTCTATCGCCTTACACATTTACTCGAAGGGAAGTTGGGGATGAGGATGTTTCACTA
AAAATTACACACTGTGGAATATGTTATGCTGATATGCTCTTTACCAAGAATAGGTTGGGA
GACTCAAGATATCCGTTGGTTCCTGGGCATGAGATTGTTGGGATTGTGAAAGAGGTTGGT
TCCAATGTTCATCACTTCAAAGTTGGCCATAGAGTTGGAGTTGGAGCATATGTCAATTCA
TGCAGAGAATGCGAGTCTTGTAACCAGAGTCTAGAAGTTTATTGCTCGAAGGGATCAGTC
TATACAAGTAATGGGGTTGATGCCGATGGCACGATTACAAATGGAGGATATTCTAGTTTC
ATTGTCGTCCATGAAAGGTACTGTTTCAGGATACCTGATGAGTACCCATTAGCTTTAGCA
GCACCCTTGCTATGTCCTGGAATTACTGCCTACTCTCCCATGGTGCGCCACAAGATGAAC
CAACCTGGTAAATCTCTAGAAGTGATTGGGCTAGGTGGTGTTGGTCACTTGGCTGTCAAG
TTTGGGAAGGCTTTCGGATTGAATGTAAAACTTTTCAGCACAAGTATATCCAAGAAAGAG
GAGGCATTAAGTCTGCTTGGAGATGACAATTTTGTGGTCTCATCAGATGAACAACAGATG
AAGGCAATGGCTAATTCACTTGACTTTATAATTGACACTGCATCTGGGGATCACTCACTT
GATCACTATATGTCATGTTTGAAGACTGCTGGTGTCCTAGCCCTAGTGGGCTTCCCTGGT
GATCAAATCAAACTCAGTCCTGCAAGTCTCCTTAGGGGTATGAAAACCATCTCTGGAAGT
CTAGTAGGTGGTGTGAAGGAGACTCAAGAAATGTTGGATTTTTGTGCTGCACACAAAATA
TACCCAGACATCGAAATAGTTCCAATCCAGTATGTAAATGAAGCTTGGGAGAGGCTGACA
AAGGGCGATGTGAAGTACCGGTTTGTAATTGATGTTGAGAACTCCCTGAAGTGA

Peptide Sequence

PEP ID

VIT_00s0174g00270.t01
PEP Infomation

pep chromosome:12X:Un:7152028:7153661:1 gene:VIT_00s0174g00270 transcript:VIT_00s0174g00270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSKPDMMNNNCLGWAARDESGVLSPYTFTRREVGDEDVSLKITHCGICYADMLFTKNRLG
DSRYPLVPGHEIVGIVKEVGSNVHHFKVGHRVGVGAYVNSCRECESCNQSLEVYCSKGSV
YTSNGVDADGTITNGGYSSFIVVHERYCFRIPDEYPLALAAPLLCPGITAYSPMVRHKMN
QPGKSLEVIGLGGVGHLAVKFGKAFGLNVKLFSTSISKKEEALSLLGDDNFVVSSDEQQM
KAMANSLDFIIDTASGDHSLDHYMSCLKTAGVLALVGFPGDQIKLSPASLLRGMKTISGS
LVGGVKETQEMLDFCAAHKIYPDIEIVPIQYVNEAWERLTKGDVKYRFVIDVENSLK

Transcript Sequence

Transcript ID

VIT_00s0174g00270.t01
Transcript Infomation

cdna chromosome:12X:Un:7152028:7153661:1 gene:VIT_00s0174g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTTACAGATGAGCAAACCAGATATGATGAACAATAACTGCCTTGGATGGGCAGCAAGA
GACGAATCTGGAGTTCTATCGCCTTACACATTTACTCGAAGGGAAGTTGGGGATGAGGAT
GTTTCACTAAAAATTACACACTGTGGAATATGTTATGCTGATATGCTCTTTACCAAGAAT
AGGTTGGGAGACTCAAGATATCCGTTGGTTCCTGGGCATGAGATTGTTGGGATTGTGAAA
GAGGTTGGTTCCAATGTTCATCACTTCAAAGTTGGCCATAGAGTTGGAGTTGGAGCATAT
GTCAATTCATGCAGAGAATGCGAGTCTTGTAACCAGAGTCTAGAAGTTTATTGCTCGAAG
GGATCAGTCTATACAAGTAATGGGGTTGATGCCGATGGCACGATTACAAATGGAGGATAT
TCTAGTTTCATTGTCGTCCATGAAAGGTACTGTTTCAGGATACCTGATGAGTACCCATTA
GCTTTAGCAGCACCCTTGCTATGTCCTGGAATTACTGCCTACTCTCCCATGGTGCGCCAC
AAGATGAACCAACCTGGTAAATCTCTAGAAGTGATTGGGCTAGGTGGTGTTGGTCACTTG
GCTGTCAAGTTTGGGAAGGCTTTCGGATTGAATGTAAAACTTTTCAGCACAAGTATATCC
AAGAAAGAGGAGGCATTAAGTCTGCTTGGAGATGACAATTTTGTGGTCTCATCAGATGAA
CAACAGATGAAGGCAATGGCTAATTCACTTGACTTTATAATTGACACTGCATCTGGGGAT
CACTCACTTGATCACTATATGTCATGTTTGAAGACTGCTGGTGTCCTAGCCCTAGTGGGC
TTCCCTGGTGATCAAATCAAACTCAGTCCTGCAAGTCTCCTTAGGGGTATGAAAACCATC
TCTGGAAGTCTAGTAGGTGGTGTGAAGGAGACTCAAGAAATGTTGGATTTTTGTGCTGCA
CACAAAATATACCCAGACATCGAAATAGTTCCAATCCAGTATGTAAATGAAGCTTGGGAG
AGGCTGACAAAGGGCGATGTGAAGTACCGGTTTGTAATTGATGTTGAGAACTCCCTGAAG
TGATCACA