Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_00s0125g00270.t01
CDS Infomation

cds chromosome:12X:Un:1929272:1946560:1 gene:VIT_00s0125g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGGGCTTTTAACTGGGGATCCCTCGAATAGTGGAATTTTTGAGGATGGATCTTGC
TGCAATTCAAAGGATGGGCTAGAGGAAGGTGGTCATTGGTATATGTCTAGGAAGGAAATA
GAAGAAAATTCCCCATCAAGAAGAGATGGCATTGACTTGAGGAAAGAGACATATTTCCGA
AAATCATACTGCACTTTCTTGCAGGATTTAGGCATGAGGCTTAAAGTACCCCAGGTAACT
ATAGCCACAGCAATAATATTTTGTCATCGGTTCTTTCTTTGCCAATCTCACGCAAAGAAT
GACAGAAGGACCATCGCCACAGTATGCATGTTCCTCGCAGGGAAGGTTGAAGAGACTCCA
CGCCCACTGAAGGATGTTATCCTTGTTTCCTATGAAATAATTCATAAAAGGGATCCTGCT
GCTGTCCAGAAGATCAAACAGAAGGAAGTATATGAGCAACAAAAAGAGCTAATTTTAATT
GGAGAGAGGGTTGTACTTGCAACTCTAGGTTTTGACCTCAATGTTCACCACCCATATAAA
CCCCTTGTTGAGGCAATGAAAAAATTCAAAGCCGCACAGGATGCTCTTGCTCAGGTTGCA
TGGAATTTTGCTCTTGCTCAAGTTGCATGGAATTTTGTCAATGATGGGCTGAGGACATCA
CTCTGCCTGCAATTTAAGCCCGACCACATTGCAGCAGGTGCCATTTTCCTTGCTGCCAAG
TTTCTCAAAGTGAAGCTTCCATCGGATGGTGAGGTGGTCTGGTGGCAAGAATTTGATGTC
ACCCCACGCCAGTTGGAGGAGATTAGCAATCAAATGTTGGAACTGTATGAGCAAAACAGA
GTGCCTCCACCTCAAGGGAGTGAAATGGAAGTTAACGCCAGTGGTGGACTAAACCATAGG
GGCACAACAAAAGCTCCAGTTGCCAATGAGGAATCCTTACCGGCTAATAGTCATGCTCAA
GCAGGGGTTGGAGTGGTGTCTACATTGAAGCCTGTAACTGCAAGGCAGTCATGGCATCGG
CCAGCATCTGACAATTCAACTGCTGGTAATCATGGAGCACTCGTGAAAGGCACCCAAAAT
CTAAGTAATGATAGTGGGAGCTCTGAGATGGGTAGTGTTATAACTGATCAGATGGCAGAT
GGAGAGGCTCCGGGTGGATTTAAATCTGTGCCAGACCAGATTGAGGGGGATAATGAAGAA
GGGAATGGTGGGAGAGATGATACCACATCAACAAGAGAATGGAAGAATAATGGTGCGTTA
CACAAGTCAGAGAGGGTGGTGGGTGGTCAAAATATGGAGACTCAAGAAGGATCATCACCC
AAATCACCTCAAGATGGAATGATTAAAATGATTGACAAAGATAAGGTGAAAGCAGCACTT
GAGAAAAGGAGAAAGTCCCGTGGAGAGGTGATCAGGAAAAAGGAGTTGGTGGATGAGGAT
GATCTCATTGAGAGGGAGCTGGAAGATGGTGTTGAATTGGATGCCAAGGATGAGAAGATC
AAGCGAGAGAGAAGGCAGAGCTGGTCTAAAACTGAGAGTCCCTGTTATACCAAGGACCAA
AAGCATACAGGAGATAGAAACCCCCTTGGAACGGAGGTAGAGAATATCGAAGAAGGGGAG
ATGTTGGATGACGCATCGCCCAAGTTCAACAATCGGAAGAGAAAGGAAAGGAGCCCACCT
GATATACAGTCGGAGGCCAAAAAGTGGACTGATTCTGCTCCTGGGTGCCACCACCGTAGT
AATCACCAAGGGCATCCTTAA

Peptide Sequence

PEP ID

VIT_00s0125g00270.t01
PEP Infomation

pep chromosome:12X:Un:1929272:1946560:1 gene:VIT_00s0125g00270 transcript:VIT_00s0125g00270.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGLLTGDPSNSGIFEDGSCCNSKDGLEEGGHWYMSRKEIEENSPSRRDGIDLRKETYFR
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLCQSHAKNDRRTIATVCMFLAGKVEETP
RPLKDVILVSYEIIHKRDPAAVQKIKQKEVYEQQKELILIGERVVLATLGFDLNVHHPYK
PLVEAMKKFKAAQDALAQVAWNFALAQVAWNFVNDGLRTSLCLQFKPDHIAAGAIFLAAK
FLKVKLPSDGEVVWWQEFDVTPRQLEEISNQMLELYEQNRVPPPQGSEMEVNASGGLNHR
GTTKAPVANEESLPANSHAQAGVGVVSTLKPVTARQSWHRPASDNSTAGNHGALVKGTQN
LSNDSGSSEMGSVITDQMADGEAPGGFKSVPDQIEGDNEEGNGGRDDTTSTREWKNNGAL
HKSERVVGGQNMETQEGSSPKSPQDGMIKMIDKDKVKAALEKRRKSRGEVIRKKELVDED
DLIERELEDGVELDAKDEKIKRERRQSWSKTESPCYTKDQKHTGDRNPLGTEVENIEEGE
MLDDASPKFNNRKRKERSPPDIQSEAKKWTDSAPGCHHRSNHQGHP

Transcript Sequence

Transcript ID

VIT_00s0125g00270.t01
Transcript Infomation

cdna chromosome:12X:Un:1929272:1946560:1 gene:VIT_00s0125g00270 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTCTCAATGACAAAGATCTGTTCCTGCTATAGCAGTCATCTATTTTTTATAGTATCAT
AGTCTTAGACTGATACATATGGCTGGGCTTTTAACTGGGGATCCCTCGAATAGTGGAATT
TTTGAGGATGGATCTTGCTGCAATTCAAAGGATGGGCTAGAGGAAGGTGGTCATTGGTAT
ATGTCTAGGAAGGAAATAGAAGAAAATTCCCCATCAAGAAGAGATGGCATTGACTTGAGG
AAAGAGACATATTTCCGAAAATCATACTGCACTTTCTTGCAGGATTTAGGCATGAGGCTT
AAAGTACCCCAGGTAACTATAGCCACAGCAATAATATTTTGTCATCGGTTCTTTCTTTGC
CAATCTCACGCAAAGAATGACAGAAGGACCATCGCCACAGTATGCATGTTCCTCGCAGGG
AAGGTTGAAGAGACTCCACGCCCACTGAAGGATGTTATCCTTGTTTCCTATGAAATAATT
CATAAAAGGGATCCTGCTGCTGTCCAGAAGATCAAACAGAAGGAAGTATATGAGCAACAA
AAAGAGCTAATTTTAATTGGAGAGAGGGTTGTACTTGCAACTCTAGGTTTTGACCTCAAT
GTTCACCACCCATATAAACCCCTTGTTGAGGCAATGAAAAAATTCAAAGCCGCACAGGAT
GCTCTTGCTCAGGTTGCATGGAATTTTGCTCTTGCTCAAGTTGCATGGAATTTTGTCAAT
GATGGGCTGAGGACATCACTCTGCCTGCAATTTAAGCCCGACCACATTGCAGCAGGTGCC
ATTTTCCTTGCTGCCAAGTTTCTCAAAGTGAAGCTTCCATCGGATGGTGAGGTGGTCTGG
TGGCAAGAATTTGATGTCACCCCACGCCAGTTGGAGGAGATTAGCAATCAAATGTTGGAA
CTGTATGAGCAAAACAGAGTGCCTCCACCTCAAGGGAGTGAAATGGAAGTTAACGCCAGT
GGTGGACTAAACCATAGGGGCACAACAAAAGCTCCAGTTGCCAATGAGGAATCCTTACCG
GCTAATAGTCATGCTCAAGCAGGGGTTGGAGTGGTGTCTACATTGAAGCCTGTAACTGCA
AGGCAGTCATGGCATCGGCCAGCATCTGACAATTCAACTGCTGGTAATCATGGAGCACTC
GTGAAAGGCACCCAAAATCTAAGTAATGATAGTGGGAGCTCTGAGATGGGTAGTGTTATA
ACTGATCAGATGGCAGATGGAGAGGCTCCGGGTGGATTTAAATCTGTGCCAGACCAGATT
GAGGGGGATAATGAAGAAGGGAATGGTGGGAGAGATGATACCACATCAACAAGAGAATGG
AAGAATAATGGTGCGTTACACAAGTCAGAGAGGGTGGTGGGTGGTCAAAATATGGAGACT
CAAGAAGGATCATCACCCAAATCACCTCAAGATGGAATGATTAAAATGATTGACAAAGAT
AAGGTGAAAGCAGCACTTGAGAAAAGGAGAAAGTCCCGTGGAGAGGTGATCAGGAAAAAG
GAGTTGGTGGATGAGGATGATCTCATTGAGAGGGAGCTGGAAGATGGTGTTGAATTGGAT
GCCAAGGATGAGAAGATCAAGCGAGAGAGAAGGCAGAGCTGGTCTAAAACTGAGAGTCCC
TGTTATACCAAGGACCAAAAGCATACAGGAGATAGAAACCCCCTTGGAACGGAGGTAGAG
AATATCGAAGAAGGGGAGATGTTGGATGACGCATCGCCCAAGTTCAACAATCGGAAGAGA
AAGGAAAGGAGCCCACCTGATATACAGTCGGAGGCCAAAAAGTGGACTGATTCTGCTCCT
GGGTGCCACCACCGTAGTAATCACCAAGGGCATCCTTAAAAGTAGAATTATGTGAGGCCA
TTTACTTACAGTATTAGTATATGATTTATATCTGGGATGCCAAGACTTTTTCCAAGTAGT
AGTATTACACTATTATATGAATTGGAATTGGAGGGTAGCTGGTTATGGCATGGTGTTTTT
GGATGTTTCAGTGGGGTTACTGGAAGGTGATGGGAGGGCATTTATTTATTTATTCATTTA
TTGCCACGTTCATGTTTGCTGCACTTGGTGATTTATTATTATGTTGTATTACCCTGCCCC
TCTAACAATCACAACTCCATAGCTAATTCTTTTTGTTAGTGATTATTATATTCCTTAAAT
ATCGATAAGCCACGGAAT