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アセンブル , シーケンス , Assemble , Sequence , Vitis riparia , Riverbank grape, Frost grape , ブドウ野生種 (riparia種)

Vitis riparia

Genome Assembly ID:t96939.G001

Sequence Name:EGFV_Vit.rip_1.0

Details of the Assembled Genome Sequences

Assembly Name EGFV_Vit.rip_1.0 Biological Sample Riparia Gloire de Montpellier
Number of Sequences 175 Number of Chromosomes 2n = 2x = 38
Total Length (bp) 500,266,779 N50 Length (bp) 23,918,791
Number of Genes 39,906 Number of Genes Source File GCF_004353265.1_EGFV_Vit.rip_1.0_protein.faa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina HiSeq; PacBio RSII; 10X Chromium Read Depth 335.0x
Assembly Method FALCON-Unzip v. v0.3.0; Supernova v. v2.1.0 Estimated Genome Size (Mb) 495
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Pierre-Francois Bert (Bordeaux University) Data Source NCBI
DOI/PMID 10.1038/s41597-019-0133-3 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:97.6%[S:93.9%,D:3.7%],F:1.4%,M:1.0%,n:1614 BUSCO Gene (pep/cds) C:99.2%[S:60.8%,D:38.4%],F:0.2%,M:0.6%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

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