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アセンブル , シーケンス , Assemble , Sequence , Zingiber officinale , Ginger , ショウガ

Zingiber officinale

Genome Assembly ID:t94328.G001

Sequence Name:Zo_v1.1

Details of the Assembled Genome Sequences

Assembly Name Zo_v1.1 Biological Sample Zhangliang
Number of Sequences 211 Number of Chromosomes 2n = 2x = 22
Total Length (bp) 3,090,429,014 N50 Length (bp) 141,269,392
Number of Genes 101,860 Number of Genes Source File GCF_018446385.1_Zo_v1.1_protein.faa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio; Illumina HiSeq; Hi-C Read Depth 179.8x(PacBio), 232.4x(Illumina)
Assembly Method Falcon v0.3.0, BWA-MEM, Juicer v1.5, 3D-DNA Estimated Genome Size (Mb) 1,593
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Yong Zou(Chongqing University of Arts and Sciences), Jianbo Jian(BGI-Shenzhen), Qingyou Xia(Southwest University), Yiqing Liu(Yangtze University) Data Source NCBI
DOI/PMID 10.1038/s41438-021-00627-7 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.5%[S:6.9%,D:91.6%],F:0.7%,M:0.8%,n:1614 BUSCO Gene (pep/cds) C:99.0%[S:5.0%,D:94.0%],F:0.3%,M:0.7%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

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