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アセンブル , シーケンス , Assemble , Sequence , Camelina sativa , False flax , ナガミノアマナズナ

Camelina sativa

Genome Assembly ID:t90675.G001

Sequence Name:Cs

Details of the Assembled Genome Sequences

Assembly Name Cs Biological Sample DH55
Number of Sequences 37,212 Number of Chromosomes 2n = 2x = 40
Total Length (bp) 641,356,059 N50 Length (bp) 30,099,736
Number of Genes 107,481 Number of Genes Source File GCF_000633955.1_Cs_protein.faa
Number of Genes Annotated by Hayai-annotation 107,481 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, 454 Read Depth 100.0x
Assembly Method SOAPdenovo v. 2.01 Estimated Genome Size (Mb) 750
Sequencing Method Comments NA Comments A homozygous doubled haploid line and derived from C. sativa genotype SRS 933.
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Andrew G. Sharpe (National Research Council Canada), Isobel A.P. Parkin (Agriculture and Agri-Food Canada) Data Source NCBI
DOI/PMID 10.1038/ncomms4706 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.4%[S:3.6%,D:95.8%],F:0.3%,M:0.3%,n:1614 BUSCO Gene (pep/cds) C:99.6%[S:1.3%,D:98.3%],F:0.2%,M:0.2%,n:1614

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