Assembly Name | Biological Sample | Assembly Level | Annotation (gff / gff3) |
Gene (cds / gene) |
Hayai Annotation ZEN |
Transcripts (cDNA / mRNA) |
Amino Acid (pep / aa) |
Download | JBrowse | Comments |
---|---|---|---|---|---|---|---|---|---|---|
DH55 |
Chromosome |
● |
● |
● |
● |
A homozygous doubled haploid line and derived from C. sativa genotype SRS 933. |
Sequence Type |
Biological Sample | Sequence Name | Accession | JBrowse | Comments | |||
---|---|---|---|---|---|---|---|---|
Cs |
||||||||
Whole Genome Sequence (Short Read) |
B-2007-0434-12 |
|||||||
Whole Genome Sequence (Short Read) |
DH55 |
|||||||
Whole Genome Sequence (Short Read) |
DH55 |
|||||||
Whole Genome Sequence (Short Read) |
DH55 |
|||||||
Whole Genome Sequence (Short Read) |
DH55 |
|||||||
Whole Genome Sequence (Short Read) |
DH55 |
|||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL138 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL174 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL241 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL31 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL32 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL33 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL34 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL35 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL36 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL37 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL39 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL41 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL43 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL219 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL216 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL229 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL227 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL225 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL75 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL134 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL136 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL147 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL146 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL144 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL143 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL243 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL58 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL49 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL207 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL127 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL130 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL133 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL201 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL203 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL256 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL255 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL261 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL247 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL8 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL281 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL193 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL63 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL64 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL14 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL13 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL7 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL6 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL11 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL9 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL10 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL3 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL267 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL4 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL27 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL2 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL155 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL149 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL159 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL157 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL18 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL17 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL16 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL15 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL21 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL179 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL19 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL26 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL24 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL23 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL29 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL28 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL69 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL116 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL71 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL137 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL223 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL112 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL114 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL177 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL105 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL106 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL107 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL195 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL233 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL100 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL98 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL191 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL196 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL235 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL231 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL215 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
MTSD_RIL211 |
RIL derived from MT102 x MT5 |
||||||
Whole Genome Sequence (Short Read) |
CO46 |
ecotype:spring_type |
||||||
Whole Genome Sequence (Short Read) |
Joelle |
ecotype:winter_type |