Sequence Name:Cclementina_182_v1
Assembly Name | Cclementina_182_v1 | Biological Sample | cv. Clemenules |
Number of Sequences | 1,398 | Number of Chromosomes | 2n = 2x = 18 |
Total Length (bp) | 301,386,998 | N50 Length (bp) | 31,410,901 |
Number of Genes | 24,533 | Number of Genes Source File | Cclementina_182_v1.0.protein_primaryTranscriptOnly.fa |
Number of Genes Annotated by Hayai-annotation | 24,533 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Sanger | Read Depth | 6.97x |
Assembly Method | Arachne v.200710161 | Estimated Genome Size (Mb) | 370 |
Sequencing Method Comments | NA | Comments | An induced haploid plant C. x clementina 'Clemenules' |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Daniel Rokhsar (U.S. Department of Energy (DOE) Joint Genome Institute (JGI)); Frederick Gmitter (University of Florida) | Data Source | Phytozome |
DOI/PMID | 10.1038/nbt.2906 | Data Source URL | https://phytozome.jgi.doe.gov/pz/portal.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.3%[S:97.6%,D:0.7%],F:1.2%,M:0.5%,n:1614 | BUSCO Gene (pep/cds) | C:95.5%[S:94.3%,D:1.2%],F:3.1%,M:1.4%,n:1614 |