Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Salix purpurea , Purple osier , セイヨウコリヤナギ

Salix purpurea

Genome Assembly ID:t77065.G001

Sequence Name:Spurpurea_519_v5.1

Details of the Assembled Genome Sequences

Assembly Name Spurpurea_519_v5.1 Biological Sample female clone 94006
Number of Sequences 348 Number of Chromosomes 2n = 2x = 38
Total Length (bp) 329,287,719 N50 Length (bp) 14,688,223
Number of Genes 35,125 Number of Genes Source File Spurpurea_519_v5.1.protein_primaryTranscriptOnly.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio RSII Read Depth 110x
Assembly Method FALCON-UNZIP Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Stephen P. DiFazio (West Virginia University) Data Source Phytozome
DOI/PMID 10.1186/s13059-020-1952-4 Data Source URL https://phytozome.jgi.doe.gov/pz/portal.html
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format