Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Rosa chinensis var. Old Blush , China rose (var. Old Blush) , コウシンバラ (Old Blush変種)

Rosa chinensis

Genome Assembly ID:t74649.G001

Sequence Name:RchiOBHm-V2

Details of the Assembled Genome Sequences

Assembly Name RchiOBHm-V2 Biological Sample Old Blush
Number of Sequences 53 Number of Chromosomes 2n = 2x = 10
Total Length (bp) 515,118,979 N50 Length (bp) 69,643,165
Number of Genes 48,188 Number of Genes Source File GCF_002994745.2_RchiOBHm-V2_protein.faa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio RSII; Illumina Read Depth 80.0x
Assembly Method TIL-R v. Rev: 523; CANU v. 1.6 Estimated Genome Size (Mb) 560
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author F.Foucher (IRHS, Agrocampus-Ouest, INRA, Universite d'Angers) Data Source NCBI
DOI/PMID 10.1038/s41477-018-0166-1 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.8%[S:94.4%,D:4.4%],F:0.6%,M:0.6%,n:1614 BUSCO Gene (pep/cds) C:99.7%[S:64.4%,D:35.3%],F:0.0%,M:0.3%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format