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アセンブル , シーケンス , Assemble , Sequence , Coffea humblotiana , Coffee (humblotiana) , コーヒー(humblotiana種)

Coffea humblotiana

Genome Assembly ID:t59211.G001

Sequence Name:V1.0

Details of the Assembled Genome Sequences

Assembly Name V1.0 Biological Sample RM-CF-00679 (BM 19/20)
Number of Sequences 390 Number of Chromosomes 2n = 2x = 22
Total Length (bp) 420,721,971 N50 Length (bp) 29,629,744
Number of Genes 32,874 Number of Genes Source File mRNA_Cohum_active_pep_20200923.tfa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio RSCll 63 SMRT cell, Illumina Hiseq2500 Read Depth 102x
Assembly Method FALCON assembler Estimated Genome Size (Mb) 422
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Romain Guyot (Universidad Autonoma de Manizales), Dominique Crouzillat (Nestle Research-Plant Science Research Unit) Data Source Sol Genomics Network
DOI/PMID 10.1038/s41598-021-87419-0 Data Source URL https://solgenomics.net/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:95.3%[S:93.9%,D:1.4%],F:2.2%,M:2.5%,n:1614 BUSCO Gene (pep/cds) C:77.3%[S:75.6%,D:1.7%],F:11.9%,M:10.8%,n:1614

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Gene data has not been registered.

Cut-Out Genome Sequences

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