Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Zizania latifolia , Chinese wild rice, Jiaobai, Water bamboo , マコモ, マコモダケ

Zizania latifolia

Genome Assembly ID:t58934.G001

Sequence Name:GWHBFHI00000000

Details of the Assembled Genome Sequences

Assembly Name GWHBFHI00000000 Biological Sample acc. Huai'an
Number of Sequences 164 Number of Chromosomes 2n = 2x = 34
Total Length (bp) 547,397,560 N50 Length (bp) 32,785,325
Number of Genes 38,789 Number of Genes Source File GWHBFHI00000000.Protein.faa.gz
Number of Genes Annotated by Hayai-annotation 38,789 Hayai-Annotation Version zen_v2.0
Sequencing Method Oxford Nanopore Read Depth 112.46x
Assembly Method SMARTdenovo Estimated Genome Size (Mb) 606
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Ning Yan (Tobacco Research Institute of Chinese Academy of Agricultural Sciences) Data Source Genome Warehouse
DOI/PMID 10.1038/s42003-021-02993-3 Data Source URL https://ngdc.cncb.ac.cn/gwh
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.0%[S:73.0%,D:26.0%],F:0.9%,M:0.1%,n:1614 BUSCO Gene (pep/cds) C:98.2%[S:73.5%,D:24.7%],F:0.8%,M:1.0%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format