Sequence Name:Tspe_v1
Assembly Name | Tspe_v1 | Biological Sample | wild accession |
Number of Sequences | 1,289 | Number of Chromosomes | 2n = 22 |
Total Length (bp) | 823,061,212 | N50 Length (bp) | 69,013,595 |
Number of Genes | 46,877 | Number of Genes Source File | Tspe_v1_predictedproteins.fasta.gz |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Oxford Nanopore, 10x Genomics Chromium linked-reads, Hi-C | Read Depth | 48.3Gb(Illumina), 123.4Gb(10x Genomics), 25.0 Gb(hi-C) |
Assembly Method | NECAT v0.01, Flye v2.6, Canu v1.9, Supernova v2.1.1 | Estimated Genome Size (Mb) | 900 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Richard J. Edwards (UNSW Sydney) | Data Source | DRYAD |
DOI/PMID | 10.1111/1755-0998.13574 | Data Source URL | https://datadryad.org |
BUSCO Version | BUSCO Dataset | ||
BUSCO Genome | BUSCO Gene (pep/cds) |