ID | Population Name | Line List | Variant Type |
Reference Sequence | Sequence Type | Variant Counts | Data Source | Comments | Download | TASUKE+ | JBrowse | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Table | Vcf file |
|||||||||||
t52518.SNP000001 |
Japanese 9 Eustoma varieties |
SNPs, In/dels |
WGS |
16,412,137 | Shirasawa et al. 2021 |
Bowtie2/bcftools 1.9, (QUAL≥20, 8≤DP≤25, max-missing=0.5, maf≥0.05) |