Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Eustoma grandiflorum , lisianthus, Bluebell, Prairie gentian , トルコギキョウ

Eustoma grandiflorum

Genome Assembly ID:t52518.G001

Sequence Name:Egra_v1.0

Details of the Assembled Genome Sequences

Assembly Name Egra_v1.0 Biological Sample 10B-620
Number of Sequences 100 Number of Chromosomes 2n = 2x = 72
Total Length (bp) 1,324,827,894 N50 Length (bp) 35,699,481
Number of Genes 36,619 Number of Genes Source File Egra_v1.0_pep_HC.fa
Number of Genes Annotated by Hayai-annotation 36,619 Hayai-Annotation Version zen_v2.0
Sequencing Method Sequel, Hi-C Read Depth 65.8x
Assembly Method Falcon Unzip, Proximo, Allmaps Estimated Genome Size (Mb) 1,588
Sequencing Method Comments Use liknkage map for pseudomolecule construction Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Sachiko Isobe (Kazusa DNA Research Institute) Data Source Plant GARDEN
DOI/PMID 10.1101/2021.09.09.459690 Data Source URL https://plantgarden.jp/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:96.6%[S:81.9%,D:14.7%],F:1.5%,M:1.9%,n:1614 BUSCO Gene (pep/cds) C:94.0%[S:63.8%,D:30.2%],F:3.3%,M:2.7%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format