Sequence Name:Egra_v1.0
Assembly Name | Egra_v1.0 | Biological Sample | 10B-620 |
Number of Sequences | 100 | Number of Chromosomes | 2n = 2x = 72 |
Total Length (bp) | 1,324,827,894 | N50 Length (bp) | 35,699,481 |
Number of Genes | 36,619 | Number of Genes Source File | Egra_v1.0_pep_HC.fa |
Number of Genes Annotated by Hayai-annotation | 36,619 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Sequel, Hi-C | Read Depth | 65.8x |
Assembly Method | Falcon Unzip, Proximo, Allmaps | Estimated Genome Size (Mb) | 1,588 |
Sequencing Method Comments | Use liknkage map for pseudomolecule construction | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Sachiko Isobe (Kazusa DNA Research Institute) | Data Source | Plant GARDEN |
DOI/PMID | 10.1101/2021.09.09.459690 | Data Source URL | https://plantgarden.jp/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:96.6%[S:81.9%,D:14.7%],F:1.5%,M:1.9%,n:1614 | BUSCO Gene (pep/cds) | C:94.0%[S:63.8%,D:30.2%],F:3.3%,M:2.7%,n:1614 |