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アセンブル , シーケンス , Assemble , Sequence , Setaria italica , Foxtail millet , アワ

Setaria italica

Genome Assembly ID:t4555.G001

Sequence Name:Sitalica_312_v2

Details of the Assembled Genome Sequences

Assembly Name Sitalica_312_v2 Biological Sample Yugu1
Number of Sequences 336 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 405,737,341 N50 Length (bp) 47,253,416
Number of Genes 34,584 Number of Genes Source File Sitalica_312_v2.2.protein_primaryTranscriptOnly.fa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method ABI 3730xl Read Depth 8.29x
Assembly Method Arachne v.20071016 Estimated Genome Size (Mb) 406
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jeffrey L Bennetzen (University of Georgia) Data Source JGI Phytozome
DOI/PMID 10.1038/nbt.2196 Data Source URL https://phytozome-next.jgi.doe.gov/info/Sitalica_v2_2
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:97.7%[S:95.7%,D:2.0%],F:1.2%,M:1.1%,n:1614 BUSCO Gene (pep/cds) C:98.0%[S:96.1%,D:1.9%],F:1.0%,M:1.0%,n:1614

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