Sequence Name:Oryza_glaberrima_V1
Assembly Name | Oryza_glaberrima_V1 | Biological Sample | IRGC96717 |
Number of Sequences | 1,951 | Number of Chromosomes | 2n = 2x = 24 |
Total Length (bp) | 316,419,574 | N50 Length (bp) | 23,192,814 |
Number of Genes | 33,164 | Number of Genes Source File | Oryza_glaberrima.Oryza_glaberrima_V1.pep.all.fa |
Number of Genes Annotated by Hayai-annotation | 33,164 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | 454 | Read Depth | 30x |
Assembly Method | NA | Estimated Genome Size (Mb) | 411 |
Sequencing Method Comments | NA | Comments | International Rice Germplasm Collection (IRGC) accession #96717, var. CG14 |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Rod A Wing (University of Arizona), Mingsheng Chen (Chinese Academy of Sciences), Klaus F X Mayer (Helmholtz Center Munich), Mingsheng Chen (Chinese Academy of Sciences) | Data Source | Ensembl |
DOI/PMID | 10.1038/ng.3044 | Data Source URL | http://plants.ensembl.org/index.html |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:88.4%[S:86.0%,D:2.4%],F:2.1%,M:9.5%,n:1614 | BUSCO Gene (pep/cds) | C:84.7%[S:79.2%,D:5.5%],F:4.1%,M:11.2%,n:1614 |