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Oryza glaberrima

Assembled Sequences

Oryza glaberrima , African rice , イネ アフリカ種, アフリカイネ , GenBank , EMBL , DDBJ

Assembly Name Biological Sample Assembly Level Annotation
(gff / gff3)
Gene
(cds / gene)
Hayai
Annotation
ZEN
Transcripts
(cDNA / mRNA)
Amino Acid
(pep / aa)
Download JBrowse Comments

Oryza_glaberrima_V1

IRGC96717

Chromosome

International Rice Germplasm Collection (IRGC) accession #96717, var. CG14

SRA Sequences

Sequence Type

Biological Sample Sequence Name Accession JBrowse Comments

Oryza_glaberrima_V1

Whole Genome Sequence (Short Read)

Maro Tiede

DRA004592

DRX052631

strain:C0492

Whole Genome Sequence (Short Read)

DRA004592

DRX052632

strain:IRGC103777

Whole Genome Sequence (Short Read)

IRGC104038

DRA004592

DRX052633

strain:IRGC104038

Whole Genome Sequence (Short Read)

CG 14

DRA006795

DRX121721

sample_name:CG 14

Whole Genome Sequence (Short Read)

Tog 7299

SRA385386

SRX1637366

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 7149

SRA385386

SRX1637367

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 7153

SRA385386

SRX1637368

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 7357

SRA385386

SRX1637369

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 7172

SRA385386

SRX1637370

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 7176

SRA385386

SRX1637371

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 7325

SRA385386

SRX1637372

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 7183

SRA385386

SRX1637373

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Marori

SRA385386

SRX1637374

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 7275

SRA385386

SRX1637375

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Adankaru

SRA385386

SRX1637376

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Bah

SRA385386

SRX1637377

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Sokpong

SRA385386

SRX1637378

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Sokpong (large panicle)

SRA385386

SRX1637379

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Gbagai (Kelei)

SRA385386

SRX1637380

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Makassa

SRA385386

SRX1637381

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Essaniouniaye

SRA385386

SRX1637382

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Lola coyo (G)

SRA385386

SRX1637383

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Mane mousso ou assaniouniaye

SRA385386

SRX1637384

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Combo tuonkoun

SRA385386

SRX1637385

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Baladiango

SRA385386

SRX1637386

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Mano muosso

SRA385386

SRX1637387

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Malou nfouma (G)

SRA385386

SRX1637388

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Samodje 2

SRA385386

SRX1637389

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

NG77E-17

SRA385386

SRX1637390

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Ex danbatta

SRA385386

SRX1637391

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Gindah

SRA385386

SRX1637392

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Pedikum

SRA385386

SRX1637393

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Ex pende kailahun

SRA385386

SRX1637394

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Genekoi

SRA385386

SRX1637395

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Sali 1 (Black husk)

SRA385386

SRX1637396

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Gbessama 2

SRA385386

SRX1637397

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Gbalan katan

SRA385386

SRX1637398

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Ex jalingo

SRA385386

SRX1637399

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

BG 71

SRA385386

SRX1637400

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

BG 76

SRA385386

SRX1637401

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

N'konto

SRA385386

SRX1637402

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Malo rans

SRA385386

SRX1637403

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Baladian

SRA385386

SRX1637404

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Kerkimbel

SRA385386

SRX1637406

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

N'Konto

SRA385386

SRX1637407

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Manhan

SRA385386

SRX1637408

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

M'mleu waha

SRA385386

SRX1637409

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Cuisson 2

SRA385386

SRX1637410

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

TG 34

SRA385386

SRX1637411

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Gbaigai

SRA385386

SRX1637413

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Danki

SRA385386

SRX1637414

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Samande

SRA385386

SRX1637415

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Milauge

SRA385386

SRX1637416

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Koutou baly

SRA385386

SRX1637417

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Koutoun kasa

SRA385386

SRX1637418

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Saali bandje

SRA385386

SRX1637419

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Melange

SRA385386

SRX1637421

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Saali

SRA385386

SRX1637422

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Ex Santrokof kpandu

SRA385386

SRX1637423

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Gbetui 2

SRA385386

SRX1637424

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Sinyarue

SRA385386

SRX1637425

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tog 12446

SRA385386

SRX1637426

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Kyanga

SRA385386

SRX1637427

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Ex wurno

SRA385386

SRX1637428

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Mala

SRA385386

SRX1637429

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Gbensema

SRA385386

SRX1637430

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

CG 9 (2)

SRA385386

SRX1637431

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

CG 86 (3)

SRA385386

SRX1637432

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Ex toussiana

SRA385386

SRX1637436

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Balaole

SRA385386

SRX1637437

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Molole

SRA385386

SRX1637438

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Tongbon

SRA385386

SRX1637439

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Salifore

SRA385386

SRX1637440

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Bindje fore

SRA385386

SRX1637441

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Saali

SRA385386

SRX1637443

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Millcciv blanc

SRA385386

SRX1637444

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Lunduko sondu

SRA385386

SRX1637445

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Shawhon

SRA385386

SRX1637446

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Gbeke 1 (late)

SRA385386

SRX1637447

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Que

SRA385386

SRX1637448

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Dissi pala

SRA385386

SRX1637449

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Pa salkuta

SRA385386

SRX1637450

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Konowobo

SRA385386

SRX1637451

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Ewe molu

SRA385386

SRX1637452

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Bouroum bouroum

SRA385386

SRX1637453

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Ipando

SRA385386

SRX1637454

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

Morible founzan

SRA385386

SRX1637455

ecotyp:traditional cultivar/landrace

Whole Genome Sequence (Short Read)

PI450237

SRA385386

SRX1637456

Whole Genome Sequence (Short Read)

PI450396

SRA385386

SRX1637457

Whole Genome Sequence (Short Read)

PI450453

SRA385386

SRX1637458

Whole Genome Sequence (Short Read)

CG 14

SRA558554

SRX2775108

isolate:OGP

Whole Genome Sequence (Short Read)

IRGC104165

SRA721638

SRX4215143

Whole Genome Sequence (Short Read)

IRGC101049

SRA149656

SRX502305

Whole Genome Sequence (Short Read)

IRGC103520

SRA149656

SRX502307

Whole Genome Sequence (Short Read)

IRGC67563

SRA149656

SRX502313

Whole Genome Sequence (Short Read)

IRGC68939

SRA149656

SRX502314

Whole Genome Sequence (Short Read)

IRGC68976

SRA149656

SRX502315

Whole Genome Sequence (Short Read)

IRGC75500

SRA149656

SRX502316

Whole Genome Sequence (Short Read)

IRGC96841

SRA149656

SRX502317

Whole Genome Sequence (Short Read)

IRGC103486

SRA215946

SRX809776