Assembly Name | Biological Sample | Assembly Level | Annotation (gff / gff3) |
Gene (cds / gene) |
Hayai Annotation ZEN |
Transcripts (cDNA / mRNA) |
Amino Acid (pep / aa) |
Download | JBrowse | Comments |
---|---|---|---|---|---|---|---|---|---|---|
IRGC96717 |
Chromosome |
● |
● |
● |
● |
● |
International Rice Germplasm Collection (IRGC) accession #96717, var. CG14 |
Sequence Type |
Biological Sample | Sequence Name | Accession | JBrowse | Comments | |||
---|---|---|---|---|---|---|---|---|
Oryza_glaberrima_V1 |
||||||||
Whole Genome Sequence (Short Read) |
Maro Tiede |
strain:C0492 |
||||||
Whole Genome Sequence (Short Read) |
strain:IRGC103777 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC104038 |
strain:IRGC104038 |
||||||
Whole Genome Sequence (Short Read) |
CG 14 |
sample_name:CG 14 |
||||||
Whole Genome Sequence (Short Read) |
Tog 7299 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 7149 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 7153 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 7357 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 7172 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 7176 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 7325 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 7183 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Marori |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 7275 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Adankaru |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Bah |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Sokpong |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Sokpong (large panicle) |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Gbagai (Kelei) |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Makassa |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Essaniouniaye |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Lola coyo (G) |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Mane mousso ou assaniouniaye |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Combo tuonkoun |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Baladiango |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Mano muosso |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Malou nfouma (G) |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Samodje 2 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
NG77E-17 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Ex danbatta |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Gindah |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Pedikum |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Ex pende kailahun |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Genekoi |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Sali 1 (Black husk) |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Gbessama 2 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Gbalan katan |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Ex jalingo |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
BG 71 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
BG 76 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
N'konto |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Malo rans |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Baladian |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Kerkimbel |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
N'Konto |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Manhan |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
M'mleu waha |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Cuisson 2 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
TG 34 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Gbaigai |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Danki |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Samande |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Milauge |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Koutou baly |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Koutoun kasa |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Saali bandje |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Melange |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Saali |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Ex Santrokof kpandu |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Gbetui 2 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Sinyarue |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tog 12446 |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Kyanga |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Ex wurno |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Mala |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Gbensema |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
CG 9 (2) |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
CG 86 (3) |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Ex toussiana |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Balaole |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Molole |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Tongbon |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Salifore |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Bindje fore |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Saali |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Millcciv blanc |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Lunduko sondu |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Shawhon |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Gbeke 1 (late) |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Que |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Dissi pala |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Pa salkuta |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Konowobo |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Ewe molu |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Bouroum bouroum |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Ipando |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
Morible founzan |
ecotyp:traditional cultivar/landrace |
||||||
Whole Genome Sequence (Short Read) |
PI450237 |
|||||||
Whole Genome Sequence (Short Read) |
PI450396 |
|||||||
Whole Genome Sequence (Short Read) |
PI450453 |
|||||||
Whole Genome Sequence (Short Read) |
CG 14 |
isolate:OGP |
||||||
Whole Genome Sequence (Short Read) |
IRGC104165 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC101049 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC103520 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC67563 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC68939 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC68976 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC75500 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC96841 |
|||||||
Whole Genome Sequence (Short Read) |
IRGC103486 |