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アセンブル , シーケンス , Assemble , Sequence , Oryza sativa , Rice, Indica rice, Japonica rice , イネ, イネ インディカ亜種, イネ ジャポニカ亜種

Oryza sativa

Genome Assembly ID:t4530.G013

Sequence Name:GWHDRIN00000000

Details of the Assembled Genome Sequences

Assembly Name GWHDRIN00000000 Biological Sample subsp. japonica, cv. Nipponbare
Number of Sequences 12 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 385,710,679 N50 Length (bp) 31,111,469
Number of Genes 67,818 Number of Genes Source File GWHDRIN00000000.Protein.faa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Sequel II, Oxford Nanopore, Hi-C Read Depth 33.0 Gb (PacBio), 85.6 Gb (ONT), 36.4Gb (Hi-C)
Assembly Method HiFiasm v0.18.5-r500, 3D-DNA Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Qian Qian (Chinese Academy of Agricultural Sciences) Data Source Genome Warehouse
DOI/PMID 10.1016/j.molp.2023.08.003 Data Source URL https://bigd.big.ac.cn/gwh/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Genome sequence data has not been registered.