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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os12t0139400-01
PEP
Os12t0139400-01
Position on the Genome Chromosome 12
Start Position 1915773
End Position 1917702
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00169868
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Signal transduction response regulator, receiver domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Two-component response regulator ORR10
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF00072
Pfam Description Details
InterPro ID
IPR001789,IPR011006
InterPro Description Details
GO ID
GO:0005634,GO:0000160,GO:0009736
GO Description Details
GOslim ID
GO:0007154,GO:0005575,GO:0050896,GO:0005634,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(3 items)
 
Two-component response regulator ORR10
 
two-component response regulator ARR-A family
OrthoDB(1 item)
191863at33090
Signal transduction response regulator, receiver domain
Pfam(1 item)
 
Response regulator receiver domain
InterPro(2 items)
 
Signal transduction response regulator, receiver domain
 
CheY-like_superfamily
Gene ontology(3 items)
BP
phosphorelay signal transduction system
BP
cytokinin-activated signaling pathway
GO slim(5 items)
BP
cell communication
CC
cellular_component
BP
response to stimulus
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.