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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os10t0492600-01
PEP
Os10t0492600-01
Position on the Genome Chromosome 10
Start Position 18701151
End Position 18702537
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00070454
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Major intrinsic protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Probable aquaporin TIP3-1
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF00230
Pfam Description Details
InterPro ID
IPR034294,IPR023271,IPR022357,IPR000425
InterPro Description Details
GO ID
GO:0015250,GO:0005774,GO:0016021
GO Description Details
GOslim ID
GO:0005773,GO:0042044,GO:0016020,GO:0005215
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(3 items)
 
Probable aquaporin TIP3-1
 
aquaporin TIP
ko:K09873
 
OrthoDB(1 item)
164840at33090
Major intrinsic protein
Pfam(1 item)
 
Major intrinsic protein
InterPro(4 items)
 
Aquaporin_transptr
 
Aquaporin-like
 
Major intrinsic protein
Gene ontology(3 items)
MF
water channel activity
CC
vacuolar membrane
CC
integral component of membrane
GO slim(4 items)
BP
fluid transport
MF
transporter activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.