Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os09t0134500-01
PEP
Os09t0134500-01
Position on the Genome Chromosome 9
Start Position 2607421
End Position 2615934
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02475624
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
FY-rich, C-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Histone-lysine N-methyltransferase TRX1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00855,PF00856,PF05965,PF05964
Pfam Description Details
InterPro ID
IPR003616,IPR003888,IPR002219,IPR041956,IPR042010,IPR034732,IPR003889,IPR002999,IPR001214,IPR011011,IPR000313,IPR019786,IPR019787,IPR013083,IPR001965
InterPro Description Details
GO ID
GO:0000785,GO:0009908,GO:0005634,GO:0006355,GO:0035556,GO:0003682,GO:0042054,GO:0018024,GO:0051568,GO:0046872,GO:0048578
GO Description Details
GOslim ID
GO:0000003,GO:0032502,GO:0016740,GO:0050896,GO:0006464,GO:0032501,GO:0005575,GO:0005634,GO:0006351,GO:0043167,GO:0003682,GO:0051276,GO:0050789,GO:0007154,GO:0005694
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.