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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os08t0438400-01
PEP
Os08t0438400-01
Position on the Genome Chromosome 8
Start Position 21307601
End Position 21309069
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00660927
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc-finger homeodomain protein 10
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Os08g0438400 protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF04770
Pfam Description Details
InterPro ID
IPR006455,IPR009057,IPR006456
InterPro Description Details
GO ID
GO:0005634
GO Description Details
GOslim ID
GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Os08g0438400 protein
OrthoDB(1 item)
190914at33090
Zinc-finger homeodomain protein 10
Pfam(1 item)
 
ZF-HD protein dimerisation region
InterPro(3 items)
 
Homeodomain_ZF_HD
 
Homeobox-like_sf
 
ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene ontology(1 item)
GO slim(1 item)

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.