Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os04t0654700-02
PEP
Os04t0654700-02
Position on the Genome Chromosome 4
Start Position 33394508
End Position 33397972
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00068979
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
JAB1/MPN/MOV34 metalloenzyme domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
COP9 signalosome complex subunit 5
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF01398,PF18323
Pfam Description Details
InterPro ID
IPR037740,IPR037518,IPR040961,IPR000555
InterPro Description Details
GO ID
GO:0008237,GO:0008180,GO:1990641,GO:0019784,GO:0005737,GO:0000338,GO:0007275,GO:0004222,GO:0070122,GO:0046872
GO Description Details
GOslim ID
GO:0005737,GO:0008233,GO:0043167,GO:0032991,GO:0050896,GO:0006508,GO:0005634,GO:0032502,GO:0006464,GO:0032501
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.