Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os04t0590200-01
PEP
Os04t0590200-01
Position on the Genome Chromosome 4
Start Position 29831246
End Position 29832981
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00053537
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
AT-hook motif nuclear-localized protein
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
AT-hook motif nuclear-localized protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03479
Pfam Description Details
InterPro ID
IPR005175,IPR014476
InterPro Description Details
GO ID
GO:0005634,GO:0003700,GO:0003680
GO Description Details
GOslim ID
GO:0003676,GO:0006351,GO:0065009,GO:0050789,GO:0005634
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.