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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os04t0182200-01
PEP
Os04t0182200-01
Position on the Genome Chromosome 4
Start Position 5590414
End Position 5592679
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00085953
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Oxoglutarate/iron-dependent dioxygenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
OSJNBa0027O01.11 protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF14226,PF03171
Pfam Description Details
InterPro ID
IPR027443,IPR005123,IPR026992
InterPro Description Details
GO ID
GO:0046872,GO:0016491
GO Description Details
GOslim ID
GO:0016491,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
OSJNBa0027O01.11 protein
OrthoDB(1 item)
109221at33090
Oxoglutarate/iron-dependent dioxygenase
Pfam(2 items)
 
non-haem dioxygenase in morphine synthesis N-terminal
 
2OG-Fe(II) oxygenase superfamily
InterPro(3 items)
 
Oxoglutarate/iron-dependent dioxygenase
 
Non-haem dioxygenase N-terminal domain
Gene ontology(2 items)
MF
metal ion binding
MF
oxidoreductase activity
GO slim(2 items)
MF
oxidoreductase activity

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.