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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os03t0267200-01
PEP
Os03t0267200-01
Position on the Genome Chromosome 3
Start Position 8837821
End Position 8838527
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00213298
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Alpha crystallin/Hsp20 domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
17.7 kDa class I heat shock protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF00011
Pfam Description Details
InterPro ID
IPR002068,IPR031107,IPR008978
InterPro Description Details
GO ID
GO:0051259,GO:0046685,GO:0006457,GO:0005737,GO:0000302,GO:0043621,GO:0046686,GO:0051082,GO:0042542,GO:0045471,GO:0046688,GO:0009651,GO:0009408
GO Description Details
GOslim ID
GO:0005737,GO:0050896,GO:0005515,GO:0006457,GO:0065003
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(3 items)
 
17.7 kDa class I heat shock protein
 
HSP20 family protein
OrthoDB(1 item)
228350at33090
Alpha crystallin/Hsp20 domain
Pfam(1 item)
 
Hsp20/alpha crystallin family
InterPro(3 items)
 
Alpha crystallin/Hsp20 domain
 
HSP20-like_chaperone
Gene ontology(13 items)
BP
protein complex oligomerization
BP
response to arsenic-containing substance
BP
protein folding
BP
response to reactive oxygen species
MF
protein self-association
BP
response to cadmium ion
MF
unfolded protein binding
BP
response to hydrogen peroxide
BP
response to ethanol
BP
response to copper ion
BP
response to salt stress
BP
response to heat
GO slim(5 items)
BP
response to stimulus
MF
protein binding
BP
protein folding
BP
protein-containing complex assembly

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.