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アセンブル , シーケンス , Assemble , Sequence , Eleusine coracana subsp. coracana , Finger millet (ssp. coracana) , シコクビエ (coracana亜種)

Eleusine coracana

Genome Assembly ID:t4511.G002

Sequence Name:Ragi PR202 v. 2.0

Details of the Assembled Genome Sequences

Assembly Name Ragi PR202 v. 2.0 Biological Sample subsp. coracana, cv. PR202, IC number 479099
Number of Sequences 1,196 Number of Chromosomes 2n = 4x = 36
Total Length (bp) 1,229,373,533 N50 Length (bp) 23,885,297
Number of Genes 57,180 Number of Genes Source File GCA_021604985.1_Ragi_PR202_v._2.0_protein.faa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, PacBio RS II, Bionano optical map Read Depth 140x (Illumina), 16x (PacBio)
Assembly Method Platanus v1.2.4, DBG2OLC, SSPACE v3.0, IrysSolve_ v2.1 Estimated Genome Size (Mb) 1,500
Sequencing Method Comments NA Comments Hybrid de novo assembly
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Kentaro K Shimizu (University of Zurich) Data Source NCBI
DOI/PMID 10.1093/dnares/dsx036 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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