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アセンブル , シーケンス , Assemble , Sequence , Eleusine coracana subsp. coracana , Finger millet (ssp. coracana) , シコクビエ (coracana亜種)

Eleusine coracana

Genome Assembly ID:t4511.G001

Sequence Name:Eleusine coracana v1.1

Details of the Assembled Genome Sequences

Assembly Name Eleusine coracana v1.1 Biological Sample subsp. coracana, cv. KNE 796
Number of Sequences 532 Number of Chromosomes 2n = 4x = 36
Total Length (bp) 1,111,714,373 N50 Length (bp) 61,270,980
Number of Genes 48,836 Number of Genes Source File Ecoracana_560_v1.1.protein_primaryTranscriptOnly.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Sequel I, Hi-C Read Depth 84.71x (PacBio), 164.2x (Hi-C)
Assembly Method MECAT v1.4, JUICER v1.8.9, BWA-mem v0.7.17-r1188 Estimated Genome Size (Mb) 1,130
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Katrien M. Devos (University of Georgia) Data Source Phytozome
DOI/PMID 10.1038/s41467-023-38915-6 Data Source URL https://phytozome.jgi.doe.gov/pz/portal.html
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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