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アセンブル , シーケンス , Assemble , Sequence , Camellia sinensis var. sinensis , Tea, Black tea, Chinese Oolong tea (var. sinensis) , チャ, チャノキ (sinensis変種)

Camellia sinensis

Genome Assembly ID:t4442.G008

Sequence Name:GWHACFB00000000

Details of the Assembled Genome Sequences

Assembly Name GWHACFB00000000 Biological Sample var. sinensis, cv. Longjin 43
Number of Sequences 30,544 Number of Chromosomes 2n = 2x = 30
Total Length (bp) 3,260,671,035 N50 Length (bp) 143,847,529
Number of Genes 33,556 Number of Genes Source File GWHACFB00000000.Protein.faa.gz
Number of Genes Annotated by Hayai-annotation 33,556 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio RSII, Hi-C Read Depth 60x
Assembly Method WTDBG v1.2.8, BWA-MEM v0.7.15 Estimated Genome Size (Mb) 3,320
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Yajun Yang (Chinese Academy of Agricultural Sciences) Data Source Genome Warehouse
DOI/PMID 10.1038/s41467-020-18228-8 Data Source URL https://bigd.big.ac.cn/gwh/
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:93.4%[S:83.6%,D:9.7%],F:3.5%,M:3.1%,n:1614 BUSCO Gene (pep/cds) C:83.9%[S:76.6%,D:7.2%],F:7.6%,M:8.6%,n:1614

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