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アセンブル , シーケンス , Assemble , Sequence , Camellia sinensis var. sinensis , Tea, Black tea, Chinese Oolong tea (var. sinensis) , チャ, チャノキ (sinensis変種)

Camellia sinensis

Genome Assembly ID:t4442.G007

Sequence Name:GWHBAUV00000000

Details of the Assembled Genome Sequences

Assembly Name GWHBAUV00000000 Biological Sample var. sinensis, cv. Huangdan (HD)
Number of Sequences 43 Number of Chromosomes 2n = 2x = 30
Total Length (bp) 5,879,548,707 N50 Length (bp) 213,387,167
Number of Genes 88,514 Number of Genes Source File GWHBAUV00000000.Protein.faa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Sequel II, Hi-C Read Depth 18.67x (PacBio), 111.50x (Hi-C)
Assembly Method Hifiasm, ALLHiC, RaGOO v1.1 Estimated Genome Size (Mb) 2,940
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Naixing Ye (Fujian Agriculture and Forestry University/Key Laboratory of Tea Science in Universities of Fujian Province) Data Source Genome Warehouse
DOI/PMID 10.1038/s41438-021-00542-x Data Source URL https://bigd.big.ac.cn/gwh/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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