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アセンブル , シーケンス , Assemble , Sequence , Camellia sinensis , Tea, black tea , チャ, チャノキ

Camellia sinensis

Genome Assembly ID:t4442.G001

Sequence Name:DASZ

Details of the Assembled Genome Sequences

Assembly Name DASZ Biological Sample wild tea tree 'DASZ'
Number of Sequences 1,231 Number of Chromosomes 2n = 2x = 30
Total Length (bp) 3,112,992,050 N50 Length (bp) 204,210,610
Number of Genes 33,021 Number of Genes Source File DASZ.Protein.faa
Number of Genes Annotated by Hayai-annotation 33,021 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBIO, illumina, Hi-C Read Depth 100x
Assembly Method Falcon v0.3.0, BWA MEM v0.7.16a, Pilon v1.22 Estimated Genome Size (Mb) 3,000
Sequencing Method Comments NA Comments DASZ is an ancient tea tree found in wild condition (Mandani Village in Yunnan Province).
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Weiwei Wen (Huazhong Agricultural University) Data Source figshare database (Assembly and annotation of DASZ genome)
DOI/PMID 10.1038/s41467-020-17498-6 Data Source URL https://doi.org/10.6084/m9.figshare.12560462.v1
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.0%[S:87.2%,D:10.8%],F:1.0%,M:1.0%,n:1614 BUSCO Gene (pep/cds) C:83.3%[S:77.8%,D:5.5%],F:7.2%,M:9.5%,n:1614

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