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アセンブル , シーケンス , Assemble , Sequence , Ipomoea batatas , Sweet potato , サツマイモ

Ipomoea batatas

Genome Assembly ID:t4120.G001

Sequence Name:IBA_r1.0

Details of the Assembled Genome Sequences

Assembly Name IBA_r1.0 Biological Sample Xushu 18
Number of Sequences 109,986 Number of Chromosomes 2n = 6x = 90
Total Length (bp) 2,907,375,442 N50 Length (bp) 23,279,505
Number of Genes 175,633 Number of Genes Source File IBA_r1.0.complete.cds.fa
Number of Genes Annotated by Hayai-annotation 175,748 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina PE, MP, 10X Genomics, PacBio Read Depth 365.8x
Assembly Method Denovo MAGIC 3, Linkage map Estimated Genome Size (Mb) 2,604
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Sachiko Isobe (Kazusa DNA Res Inst) Data Source Plant GARDEN
DOI/PMID Data Source URL https://plantgarden.jp/
BUSCO Version 5.2.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.5%[S:1.7%,D:97.8%],F:0.2%,M:0.3%,n:1614 BUSCO Gene (pep/cds) C:96.5%[S:12.6%,D:83.9%],F:2.2%,M:1.3%,n:1614

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