Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400049874 |
| PEP | PGSC0003DMP400033664 |
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| Position on the Genome | Chromosome | ST4.03ch10 | |
| Start Position | 5918158 | ||
| End Position | 5924227 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00649245 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | WD40 repeat |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | Ubiquitin ligase protein cop1 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF00400 |
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| Pfam Description | Details | ||
| InterPro ID | IPR001680,IPR000719,IPR036322,IPR019775,IPR020472,IPR017986,IPR011009,IPR015943 |
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| InterPro Description | Details | ||
| GO ID | GO:0009658,GO:0048575,GO:0010100,GO:0009637,GO:2000028,GO:0009640,GO:0010114,GO:0042802,GO:0016604,GO:0010218,GO:0010017,GO:0005524,GO:0004672 |
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| GO Description | Details | ||
| GOslim ID | GO:0016740,GO:0050896,GO:0050789,GO:0032502,GO:0005634,GO:0043167,GO:0032501,GO:0009657,GO:0000003,GO:0007154,GO:0000166,GO:0006793,GO:0005515,GO:0006464 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:102593062 | ||
