Sequence Name:M6_v4.1_PM
Assembly Name | M6_v4.1_PM | Biological Sample | M6 |
Number of Sequences | 13 | Number of Chromosomes | 2n = 2x = 24 |
Total Length (bp) | 867,067,562 | N50 Length (bp) | 49,944,156 |
Number of Genes | 37,740 | Number of Genes Source File | pasa_m6.hc.gene_models.repr.pep.fa |
Number of Genes Annotated by Hayai-annotation | 37,740 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina HiSeq 2500 | Read Depth | NA |
Assembly Method | ALLPATHS遯カ莨クG (v.51828), GapCloser (v.1.12r6) | Estimated Genome Size (Mb) | 882 |
Sequencing Method Comments | NA | Comments | M6 is a diploid inbred clone of the high遯カ霄ォlycoalkaloid遯カ螢ャroducing tuber遯カ閾」earing potato species Solanum chacoense. |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | C. Robin Buell (Michigan State University) | Data Source | Spud DB Potato Genomics Resource |
DOI/PMID | 10.1111/tpj.13857 | Data Source URL | http://potato.plantbiology.msu.edu/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.8%[S:96.1%,D:2.7%],F:0.6%,M:0.6%,n:1614 | BUSCO Gene (pep/cds) | C:93.7%[S:90.8%,D:2.9%],F:4.2%,M:2.1%,n:1614 |