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アセンブル , シーケンス , Assemble , Sequence , Solanum pimpinellifolium , Wild tomato (pimpinellifolium) , トマト野生種 (pimpinellifolium種)

Solanum pimpinellifolium

Genome Assembly ID:t4084.G001

Sequence Name:SPI_r1.1

Details of the Assembled Genome Sequences

Assembly Name SPI_r1.1 Biological Sample LA1670
Number of Sequences 14 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 808,801,754 N50 Length (bp) 66,552,494
Number of Genes 71,945 Number of Genes Source File SPI_r1.1.pep.fasta
Number of Genes Annotated by Hayai-annotation 71,945 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Read Depth 98x
Assembly Method Falcon_Unzip Estimated Genome Size (Mb) 786
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Tohru Ariizumi (University of Tsukuba) Data Source Plant GARDEN
DOI/PMID 10.1093/dnares/dsaa029 Data Source URL https://plantgarden.jp
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:97.5%[S:96.8%,D:0.7%],F:1.0%,M:1.5%,n:1614 BUSCO Gene (pep/cds) C:82.3%[S:80.2%,D:2.1%],F:7.4%,M:10.3%,n:1614

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